Petr Leiman, PhD

  • 3975 Citations
  • 29 h-Index
20002019

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2019

Modeling the Architecture of Depolymerase-Containing Receptor Binding Proteins in Klebsiella Phages

Latka, A., Leiman, P. G., Drulis-Kawa, Z. & Briers, Y., Nov 15 2019, In : Frontiers in Microbiology. 10, 2649.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Structure and Function of the Branched Receptor-Binding Complex of Bacteriophage CBA120

Plattner, M., Shneider, M. M., Arbatsky, N. P., Shashkov, A. S., Chizhov, A. O., Nazarov, S., Prokhorov, N., Taylor, N. M. I., Buth, S., Gambino, M., Gencay, Y. E., Brøndsted, L., Kutter, E. M., Knirel, Y. A. & Leiman, P., Jan 1 2019, In : Journal of Molecular Biology.

Research output: Contribution to journalArticle

4 Scopus citations

Structure and transformation of bacteriophage A511 baseplate and tail upon infection of Listeria cells

Guerrero-Ferreira, R. C., Hupfeld, M., Nazarov, S., Taylor, N. M. I., Shneider, M. M., Obbineni, J. M., Loessner, M. J., Ishikawa, T., Klumpp, J. & Leiman, P., Jan 1 2019, (Accepted/In press) In : EMBO Journal. e99455.

Research output: Contribution to journalArticle

6 Scopus citations

Target highlights in CASP13: Experimental target structures through the eyes of their authors

Lepore, R., Kryshtafovych, A., Alahuhta, M., Veraszto, H. A., Bomble, Y. J., Bufton, J. C., Bullock, A. N., Caba, C., Cao, H., Davies, O. R., Desfosses, A., Dunne, M., Fidelis, K., Goulding, C. W., Gurusaran, M., Gutsche, I., Harding, C. J., Hartmann, M. D., Hayes, C. S., Joachimiak, A. & 15 others, Leiman, P. G., Loppnau, P., Lovering, A. L., Lunin, V. V., Michalska, K., Mir-Sanchis, I., Mitra, A. K., Moult, J., Phillips, G. N., Pinkas, D. M., Rice, P. A., Tong, Y., Topf, M., Walton, J. D. & Schwede, T., Dec 1 2019, In : Proteins: Structure, Function and Bioinformatics. 87, 12, p. 1037-1057 21 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations
2018

Contractile injection systems of bacteriophages and related systems

Taylor, N. M. I., van Raaij, M. J. & Leiman, P., Jan 1 2018, (Accepted/In press) In : Molecular Microbiology.

Research output: Contribution to journalArticle

36 Scopus citations

Salmonella Phage S16 Tail Fiber Adhesin Features a Rare Polyglycine Rich Domain for Host Recognition

Dunne, M., Denyes, J. M., Arndt, H., Loessner, M. J., Leiman, P. & Klumpp, J., Dec 4 2018, In : Structure. 26, 12, p. 1573-1582.e4

Research output: Contribution to journalArticle

11 Scopus citations

Structure and analysis of R1 and R2 pyocin receptor-binding fibers

Buth, S. A., Shneider, M. M., Scholl, D. & Leiman, P. G., Aug 14 2018, In : Viruses. 10, 8, 427.

Research output: Contribution to journalArticle

12 Scopus citations
2017

Function of bacteriophage G7C esterase tailspike in host cell adsorption

Prokhorov, N., Riccio, C., Zdorovenko, E. L., Shneider, M. M., Browning, C., Knirel, Y. A., Leiman, P. & Letarov, A. V., 2017, (Accepted/In press) In : Molecular Microbiology.

Research output: Contribution to journalArticle

23 Scopus citations

Refined Cryo-EM Structure of the T4 Tail Tube: Exploring the Lowest Dose Limit

Zheng, W., Wang, F., Taylor, N. M. I., Guerrero-Ferreira, R. C., Leiman, P. & Egelman, E. H., 2017, (Accepted/In press) In : Structure.

Research output: Contribution to journalArticle

8 Scopus citations

The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence

Olszak, T., Shneider, M. M., Latka, A., Maciejewska, B., Browning, C., Sycheva, L. V., Cornelissen, A., Danis-Wlodarczyk, K., Senchenkova, S. N., Shashkov, A. S., Gula, G., Arabski, M., Wasik, S., Miroshnikov, K. A., Lavigne, R., Leiman, P. G., Knirel, Y. A. & Drulis-Kawa, Z., Dec 1 2017, In : Scientific reports. 7, 1, 16302.

Research output: Contribution to journalArticle

23 Scopus citations
2016

Genetic, Structural, and Phenotypic Properties of MS2 Coliphage with Resistance to ClO2 Disinfection

Zhong, Q., Carratalà, A., Nazarov, S., Guerrero-Ferreira, R. C., Piccinini, L., Bachmann, V., Leiman, P. & Kohn, T., Dec 20 2016, In : Environmental Science & Technology. 50, 24, p. 13520-13528 9 p.

Research output: Contribution to journalArticle

19 Scopus citations

Structure of the T4 baseplate and its function in triggering sheath contraction

Taylor, N. M. I., Prokhorov, N., Guerrero-Ferreira, R. C., Shneider, M. M., Browning, C., Goldie, K. N., Stahlberg, H. & Leiman, P., May 18 2016, In : Nature. 533, p. 346-352 7 p.

Research output: Contribution to journalArticle

109 Scopus citations
2015

Atomic structures of a bactericidal contractile nanotube in its pre- and postcontraction states

Ge, P., Scholl, D., Leiman, P., Yu, X., Miller, J. F. & Zhou, Z. H., May 11 2015, In : Nature Structural and Molecular Biology. 22, 5, p. 377-382 6 p.

Research output: Contribution to journalArticle

83 Scopus citations

Introduction to “Viruses of Microbes III” special section of Virology

Leiman, P. & Molineux, I. J., Mar 1 2015, In : Virology. 477, p. 99 1 p.

Research output: Contribution to journalArticle

Structure and biochemical characterization of bacteriophage phi92 endosialidase

Schwarzer, D., Browning, C., Stummeyer, K., Oberbeck, A., Mühlenhoff, M., Gerardy-Schahn, R. & Leiman, P., Mar 1 2015, In : Virology. 477, p. 133-143 11 p.

Research output: Contribution to journalArticle

9 Scopus citations

Structure and biophysical properties of a triple-stranded beta-helix comprising the central spike of bacteriophage T4

Buth, S. A., Menin, L., Shneider, M. M., Engel, J., Boudko, S. P. & Leiman, P. G., Aug 18 2015, In : Viruses. 7, 8, p. 4676-4706 31 p.

Research output: Contribution to journalArticle

3 Scopus citations
2014

Listeria phage A511, a model for the contractile tail machineries of SPO1-related bacteriophages

Habann, M., Leiman, P. G., Vandersteegen, K., Van den Bossche, A., Lavigne, R., Shneider, M. M., Bielmann, R., Eugster, M. R., Loessner, M. J. & Klumpp, J., Apr 2014, In : Molecular Microbiology. 92, 1, p. 84-99 16 p.

Research output: Contribution to journalArticle

37 Scopus citations

Structure and properties of the c-terminal β-helical domain of vgrg protein from escherichia coli O157

Uchida, K., Leiman, P. G., Arisaka, F. & Kanamaru, S., Mar 2014, In : Journal of Biochemistry. 155, 3, p. 173-182 10 p.

Research output: Contribution to journalArticle

18 Scopus citations
2013

Bicyclic peptide ligands pulled out of cysteine-rich peptide libraries

Chen, S., Rentero Rebollo, I., Buth, S. A., Morales-Sanfrutos, J., Touati, J., Leiman, P. G. & Heinis, C., May 1 2013, In : Journal of the American Chemical Society. 135, 17, p. 6562-6569 8 p.

Research output: Contribution to journalArticle

46 Scopus citations

Improving binding affinity and stability of peptide ligands by substituting glycines with D-amino acids

Chen, S., Gfeller, D., Buth, S. A., Michielin, O., Leiman, P. G. & Heinis, C., Jul 2013, In : ChemBioChem. 14, 11, p. 1316-1322 7 p.

Research output: Contribution to journalArticle

31 Scopus citations

PAAR-repeat proteins sharpen and diversify the type VI secretion system spike

Shneider, M. M., Buth, S. A., Ho, B. T., Basler, M., Mekalanos, J. J. & Leiman, P. G., Aug 8 2013, In : Nature. 500, 7462, p. 350-353 4 p.

Research output: Contribution to journalArticle

235 Scopus citations
2012

A multivalent adsorption apparatus explains the broad host range of phage phi92: A comprehensive genomic and structural analysis

Schwarzer, D., Buettner, F. F. R., Browning, C., Nazarov, S., Rabsch, W., Bethe, A., Oberbeck, A., Bowman, V. D., Stummeyer, K., Mühlenhoff, M., Leiman, P. G. & Gerardy-Schahn, R., Oct 2012, In : Journal of virology. 86, 19, p. 10384-10398 15 p.

Research output: Contribution to journalArticle

47 Scopus citations

Crystal structure and location of gp131 in the bacteriophage phiKZ virion

Sycheva, L. V., Shneider, M. M., Sykilinda, N. N., Ivanova, M. A., Miroshnikov, K. A. & Leiman, P. G., Dec 20 2012, In : Virology. 434, 2, p. 257-264 8 p.

Research output: Contribution to journalArticle

10 Scopus citations

Phage pierces the host cell membrane with the iron-loaded spike

Browning, C., Shneider, M. M., Bowman, V. D., Schwarzer, D. & Leiman, P. G., Feb 8 2012, In : Structure. 20, 2, p. 326-339 14 p.

Research output: Contribution to journalArticle

50 Scopus citations
2010

The Baseplate Wedges of Bacteriophage T4 Spontaneously Assemble into Hubless Baseplate-Like Structure In Vitro

Yap, M. L., Mio, K., Leiman, P. G., Kanamaru, S. & Arisaka, F., Jan 15 2010, In : Journal of Molecular Biology. 395, 2, p. 349-360 12 p.

Research output: Contribution to journalArticle

24 Scopus citations
2009

Crystallographic Insights into the Autocatalytic Assembly Mechanism of a Bacteriophage Tail Spike

Xiang, Y., Leiman, P. G., Li, L., Grimes, S., Anderson, D. L. & Rossmann, M. G., May 15 2009, In : Molecular cell. 34, 3, p. 375-386 12 p.

Research output: Contribution to journalArticle

61 Scopus citations

The Structure of Gene Product 6 of Bacteriophage T4, the Hinge-Pin of the Baseplate

Aksyuk, A. A., Leiman, P. G., Shneider, M. M., Mesyanzhinov, V. V. & Rossmann, M. G., Jun 10 2009, In : Structure. 17, 6, p. 800-808 9 p.

Research output: Contribution to journalArticle

23 Scopus citations

The tail sheath structure of bacteriophage T4: A molecular machine for infecting bacteria

Aksyuk, A. A., Leiman, P. G., Kurochkina, L. P., Shneider, M. M., Kostyuchenko, V. A., Mesyanzhinov, V. V. & Rossmann, M. G., Apr 8 2009, In : EMBO Journal. 28, 7, p. 821-829 9 p.

Research output: Contribution to journalArticle

92 Scopus citations

Type VI secretion apparatus and phage tail-associated protein complexes share a common evolutionary origin

Leiman, P. G., Basler, M., Ramagopal, U. A., Bonanno, J. B., Sauder, J. M., Pukatzki, S., Burley, S. K., Almo, S. C. & Mekalanos, J. J., Mar 17 2009, In : Proceedings of the National Academy of Sciences of the United States of America. 106, 11, p. 4154-4159 6 p.

Research output: Contribution to journalArticle

377 Scopus citations
2007

The Structures of Bacteriophages K1E and K1-5 Explain Processive Degradation of Polysaccharide Capsules and Evolution of New Host Specificities

Leiman, P. G., Battisti, A. J., Bowman, V. D., Stummeyer, K., Mühlenhoff, M., Gerardy-Schahn, R., Scholl, D. & Molineux, I. J., Aug 17 2007, In : Journal of Molecular Biology. 371, 3, p. 836-849 14 p.

Research output: Contribution to journalArticle

80 Scopus citations
2006

Evolution of Bacteriophage Tails: Structure of T4 Gene Product 10

Leiman, P. G., Shneider, M. M., Mesyanzhinov, V. V. & Rossmann, M. G., May 5 2006, In : Journal of Molecular Biology. 358, 3, p. 912-921 10 p.

Research output: Contribution to journalArticle

27 Scopus citations

From structure of the complex to understanding of the biology

Rossmann, M. G., Arisaka, F., Battisti, A. J., Bowman, V. D., Chipman, P. R., Fokine, A., Hafenstein, S., Kanamaru, S., Kostyuchenko, V. A., Mesyanzhinov, V. V., Shneider, M. M., Morais, M. C., Leiman, P. G., Palermo, L. M., Parrish, C. R. & Xiao, C., Dec 13 2006, In : Acta Crystallographica Section D: Biological Crystallography. 63, 1, p. 9-16 8 p.

Research output: Contribution to journalArticle

16 Scopus citations

Microscopic molecular machines help bacteriophages to package their genomes and infect their hosts

Leiman, P. G., Fokine, A., Chipman, P. R., Kostyuchenko, V. A., Kanamaru, S., Arisaka, F., Mesyanzhinov, V. V. & Rossmann, M. G., Aug 1 2006, In : Microscopy and Microanalysis. 12, SUPPL. 2, 1 p.

Research output: Contribution to journalArticle

2005

Functional role of the N-terminal domain of bacteriophage T4-gene product 11

Vishnevskiy, A. Y., Kurochkina, L. P., Sykilinda, N. N., Solov'eva, N. V., Shneider, M. M., Leiman, P. G. & Mesyanzhinov, V. V., Dec 22 2005, In : Biokhimiya. 70, 10, p. 1346-1354 9 p.

Research output: Contribution to journalArticle

Functional role of the N-terminal domain of bacteriophage T4-gene product 11

Vishnevskiy, A. Y., Kurochkina, L. P., Sykilinda, N. N., Solov'Eva, N. V., Shneider, M. M., Leiman, P. G. & Mesyanzhinov, V. V., Oct 1 2005, In : Biochemistry (Moscow). 70, 10, p. 1111-1118 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

Structural and functional similarities between the capsid proteins of bacteriophages T4 and HK97 point to a common ancestry

Fokine, A., Leiman, P. G., Shneider, M. M., Ahvazi, B., Boeshans, K. M., Steven, A. C., Black, L. W., Mesyanzhinov, V. V. & Rossmann, M. G., May 17 2005, In : Proceedings of the National Academy of Sciences of the United States of America. 102, 20, p. 7163-7168 6 p.

Research output: Contribution to journalArticle

149 Scopus citations

The tail structure of bacteriophage T4 and its mechanism of contraction

Kostyuchenko, V. A., Chipman, P. R., Leiman, P. G., Arisaka, F., Mesyanzhinov, V. V. & Rossmann, M. G., Sep 1 2005, In : Nature Structural and Molecular Biology. 12, 9, p. 810-813 4 p.

Research output: Contribution to journalArticle

132 Scopus citations
2004

Molecular architecture of bacteriophage T4

Mesyanzhinov, V. V., Leiman, P. G., Kostyuchenko, V. A., Kurochkina, L. P., Miroshnikov, K. A., Sykilinda, N. N. & Shneider, M. M., Nov 1 2004, In : Biochemistry (Moscow). 69, 11, p. 1190-1202 13 p.

Research output: Contribution to journalArticle

26 Scopus citations

Molecular architecture of the prolate head of bacteriophage T4

Fokine, A., Chipman, P. R., Leiman, P. G., Mesyanzhinov, V. V., Rao, V. B. & Rossmann, M. G., Apr 20 2004, In : Proceedings of the National Academy of Sciences of the United States of America. 101, 16, p. 6003-6008 6 p.

Research output: Contribution to journalArticle

210 Scopus citations

Three-dimensional rearrangement of proteins in the tail of bacteriophage T4 on infection of its host

Leiman, P. G., Chipman, P. R., Kostyuchenko, V. A., Mesyanzhinov, V. V. & Rossmann, M. G., Aug 20 2004, In : Cell. 118, 4, p. 419-429 11 p.

Research output: Contribution to journalArticle

196 Scopus citations
2003

Structure and location of gene product 8 in the bacteriophage T4 baseplate

Leiman, P. G., Shneider, M. M., Kostyuchenko, V. A., Chipman, P. R., Mesyanzhinov, V. V. & Rossmann, M. G., May 9 2003, In : Journal of Molecular Biology. 328, 4, p. 821-833 13 p.

Research output: Contribution to journalArticle

28 Scopus citations

Three-dimensional structure of bacteriophage T4 baseplate

Kostyuchenko, V. A., Leiman, P. G., Chipman, P. R., Kanamaru, S., Van Raaij, M. J., Arisaka, F., Mesyanzhinov, V. V. & Rossmann, M. G., Sep 1 2003, In : Nature Structural Biology. 10, 9, p. 688-693 6 p.

Research output: Contribution to journalArticle

143 Scopus citations
2002

Structure of the cell-puncturing device of bacteriophage T4

Kanamaru, S., Leiman, P. G., Kostyuchenko, V. A., Chipman, P. R., Mesyanzhinov, V. V., Arisaka, F. & Rossmann, M. G., Jan 31 2002, In : Nature. 415, 6871, p. 553-557 5 p.

Research output: Contribution to journalArticle

283 Scopus citations
2001

Expression and properties of bacteriophage T4 gene product 11

Kurochkina, L. P., Leiman, P. G., Venyaminov, S. Y. & Mesyanzhinov, V. V., Feb 1 2001, In : Biochemistry (Moscow). 66, 2, p. 141-146 6 p.

Research output: Contribution to journalArticle

3 Scopus citations

Expression and properties of bacteriophage T4 gene product 11

Kurochkina, L. P., Leiman, P. G., Venyaminov, S. Y. & Mesyanzhinov, V. V., Dec 1 2001, In : Biokhimiya. 66, 2, p. 180-186 7 p.

Research output: Contribution to journalArticle

Structure determination of the head-tail connector of bacteriophage φ29

Simpson, A. A., Leiman, P. G., Tao, Y., He, Y., Badasso, M. O., Jardine, P. J., Anderson, D. L. & Rossmann, M. G., Oct 3 2001, In : Acta Crystallographica Section D: Biological Crystallography. 57, 9, p. 1260-1269 10 p.

Research output: Contribution to journalArticle

71 Scopus citations
2000

Purification, crystallization and initial X-ray analysis of the head-tail connector of bacteriophage φ29

Badasso, M. O., Leiman, P. G., Tao, Y., He, Y., Ohlendorf, D. H., Rossmann, M. G. & Anderson, D., Oct 3 2000, In : Acta Crystallographica Section D: Biological Crystallography. 56, 9, p. 1187-1190 4 p.

Research output: Contribution to journalArticle

19 Scopus citations

Stoichiometry and inter-subunit interaction of the wedge initiation complex, gp10-gp11, of bacteriophage T4

Zhao, L., Takeda, S., Leiman, P. G. & Arisaka, F., Jun 15 2000, In : Biochimica et Biophysica Acta - Protein Structure and Molecular Enzymology. 1479, 1-2, p. 286-292 7 p.

Research output: Contribution to journalArticle

15 Scopus citations

Structure of bacteriophage T4 gene product 11, the interface between the baseplate and short tail fibers

Leiman, P. G., Kostyuchenko, V. A., Shneider, M. M., Kurochkina, L. P., Mesyanzhinov, V. V. & Rossmann, M. G., Aug 25 2000, In : Journal of Molecular Biology. 301, 4, p. 975-985 11 p.

Research output: Contribution to journalArticle

48 Scopus citations

Structure of the bacteriophage φ29 DNA packaging motor

Simpson, A. A., Tao, Y., Leiman, P. G., Badasso, M. O., He, Y., Jardine, P. J., Olson, N. H., Morais, M. C., Grimes, S., Anderson, D. L., Baker, T. S. & Rossmann, M. G., Dec 7 2000, In : Nature. 408, 6813, p. 745-750 6 p.

Research output: Contribution to journalArticle

408 Scopus citations