Search concepts
|
Selected Filters |
- 1 - 50 out of 178 results
- Export search results
Search results
-
2012
2′-O methylation of internal adenosine by flavivirus NS5 methyltransferase
Dong, H., Chang, D. C., Hua, M. H. C., Lim, S. P., Chionh, Y. H., Hia, F., Lee, Y. H., Kukkaro, P., Lok, S. M., Dedon, P. C. & Shi, P. Y., Apr 2012, In: PLoS pathogens. 8, 4, e1002642.Research output: Contribution to journal › Article › peer-review
85 Scopus citations -
Enterovirus 71 VPg uridylation uses a two-molecular mechanism of 3D polymerase
Sun, Y., Wang, Y., Shan, C., Chen, C., Xu, P., Song, M., Zhou, H., Yang, C., Xu, W., Shi, P. Y., Zhang, B. & Lou, Z., Dec 2012, In: Journal of virology. 86, 24, p. 13662-13671 10 p.Research output: Contribution to journal › Article › peer-review
32 Scopus citations -
Internally deleted WNV genomes isolated from exotic birds in New Mexico: Function in cells, mosquitoes, and mice
Pesko, K. N., Fitzpatrick, K. A., Ryan, E. M., Shi, P. Y., Zhang, B., Lennon, N. J., Newman, R. M., Henn, M. R. & Ebel, G. D., May 25 2012, In: Virology. 427, 1, p. 10-17 8 p.Research output: Contribution to journal › Article › peer-review
24 Scopus citations -
Ligand-bound structures of the dengue virus protease reveal the active conformation
Noble, C. G., Seh, C. C., Chao, A. T. & Shi, P. Y., Jan 2012, In: Journal of virology. 86, 1, p. 438-446 9 p.Research output: Contribution to journal › Article › peer-review
166 Scopus citations -
Point mutations in the West Nile virus (Flaviviridae; Flavivirus) RNA-dependent RNA polymerase alter viral fitness in a host-dependent manner in vitro and in vivo
Van Slyke, G. A., Ciota, A. T., Willsey, G. G., Jaeger, J., Shi, P. Y. & Kramer, L. D., May 25 2012, In: Virology. 427, 1, p. 18-24 7 p.Research output: Contribution to journal › Article › peer-review
21 Scopus citations -
Resistance analysis of an antibody that selectively inhibits dengue virus serotype-1
Zou, G., Kukkaro, P., Lok, S. M., Ng, J. K. W., Tan, G. K., Hanson, B. J., Alonso, S., MacAry, P. A. & Shi, P. Y., Sep 1 2012, In: Antiviral research. 95, 3, p. 216-223 8 p.Research output: Contribution to journal › Article › peer-review
11 Scopus citations -
Structural biology of dengue virus enzymes: Towards rational design of therapeutics
Noble, C. G. & Shi, P. Y., Nov 1 2012, In: Antiviral research. 96, 2, p. 115-126 12 p.Research output: Contribution to journal › Review article › peer-review
78 Scopus citations -
Synthesis and antiviral activity of 4,6-disubstituted pyrimido[4,5-b]indole ribonucleosides
Tichý, M., Pohl, R., Xu, H. Y., Chen, Y. L., Yokokawa, F., Shi, P. Y. & Hocek, M., Oct 15 2012, In: Bioorganic and Medicinal Chemistry. 20, 20, p. 6123-6133 11 p.Research output: Contribution to journal › Article › peer-review
37 Scopus citations -
Therapeutics for Dengue: Recommendations for Design and Conduct of Early-Phase Clinical Trials
Simmons, C. P., Wolbers, M., Nguyen, M. N., Whitehorn, J., Shi, P. Y., Young, P., Petric, R., Nguyen, V. V. C., Farrar, J. & Wills, B., Sep 2012, In: PLoS neglected tropical diseases. 6, 9, e1752.Research output: Contribution to journal › Article › peer-review
25 Scopus citations -
The stem region of premembrane protein plays an important role in the virus surface protein rearrangement during dengue maturation
Zhang, Q., Hunke, C., Yau, Y. H., Seow, V., Lee, S., Tanner, L. B., Guan, X. L., Wenk, M. R., Fibriansah, G., Chew, P. L., Kukkaro, P., Biuković, G., Shi, P. Y., Shochat, S. G., Grüber, G. & Lok, S. M., Nov 23 2012, In: Journal of Biological Chemistry. 287, 48, p. 40525-40534 10 p.Research output: Contribution to journal › Article › peer-review
32 Scopus citations -
The structural basis for serotype-specific neutralization of dengue virus by a human antibody
Teoh, E. P., Kukkaro, P., Teo, E. W., Lim, A. P. C., Tan, T. T., Yip, A., Schul, W., Aung, M., Kostyuchenko, V. A., Leo, Y. S., Chan, S. H., Smith, K. G. C., Chan, A. H. Y., Zou, G., Ooi, E. E., Kemeny, D. M., Tan, G. K., Ng, J. K. W., Ng, M. L., Alonso, S. & 5 others, , Jun 20 2012, In: Science Translational Medicine. 4, 139, 139ra83.Research output: Contribution to journal › Article › peer-review
165 Scopus citations -
U18666A, an intra-cellular cholesterol transport inhibitor, inhibits dengue virus entry and replication
Poh, M. K., Shui, G., Xie, X., Shi, P. Y., Wenk, M. R. & Gu, F., Jan 2012, In: Antiviral research. 93, 1, p. 191-198 8 p.Research output: Contribution to journal › Article › peer-review
72 Scopus citations -
2013
A chimeric dengue virus vaccine using japanese encephalitis virus vaccine strain SA14-14-2 as backbone is immunogenic and protective against either parental virus in mice and nonhuman primates
Li, X. F., Deng, Y. Q., Yang, H. Q., Zhao, H., Jiang, T., Yu, X. D., Li, S. H., Ye, Q., Zhu, S. Y., Wang, H. J., Zhang, Y., Ma, J., Yu, Y. X., Liu, Z. Y., Li, Y. H., Qin, E. D., Shi, P. Y. & Qin, C. F., Dec 2013, In: Journal of virology. 87, 24, p. 13694-13705 12 p.Research output: Contribution to journal › Article › peer-review
43 Scopus citations -
A crystal structure of the dengue virus non-structural protein 5 (NS5) polymerase delineates interdomain amino acid residues that enhance its thermostability and de novo initiation activities
Lim, S. P., Koh, J. H. K., Seh, C. C., Liew, C. W., Davidson, A. D., Chua, L. S., Chandrasekaran, R., Cornvik, T. C., Shi, P. Y. & Lescar, J., Oct 25 2013, In: Journal of Biological Chemistry. 288, 43, p. 31105-31114 10 p.Research output: Contribution to journal › Article › peer-review
55 Scopus citations -
A multidimensional platform for the purification of non-coding RNA species
Chionh, Y. H., Ho, C. H., Pruksakorn, D., Ramesh Babu, I., Ng, C. S., Hia, F., McBee, M. E., Su, D., Pang, Y. L. J., Gu, C., Dong, H., Prestwich, E. G., Shi, P. Y., Preiser, P. R., Alonso, S. & Dedon, P. C., Sep 2013, In: Nucleic acids research. 41, 17, p. e168Research output: Contribution to journal › Article › peer-review
28 Scopus citations -
A Single Amino Acid Substitution in the Core Protein of West Nile Virus Increases Resistance to Acidotropic Compounds
Martín-Acebes, M. A., Blázquez, A. B., de Oya, N. J., Escribano-Romero, E., Shi, P. Y. & Saiz, J. C., Jul 18 2013, In: PloS one. 8, 7, e69479.Research output: Contribution to journal › Article › peer-review
10 Scopus citations -
Conformational flexibility of the dengue virus RNA-Dependent RNA polymerase revealed by a complex with an inhibitor
Noble, C. G., Lim, S. P., Chen, Y. L., Liew, C. W., Yap, L., Lescar, J. & Shi, P. Y., May 2013, In: Journal of virology. 87, 9, p. 5291-5295 5 p.Research output: Contribution to journal › Article › peer-review
70 Scopus citations -
Crystal structure of enterovirus 71 RNA-dependent RNA polymerase complexed with its protein primer VPg: Implication for a trans mechanism of VPg uridylylation
Chen, C., Wang, Y., Shan, C., Sun, Y., Xu, P., Zhou, H., Yang, C., Shi, P. Y., Rao, Z., Zhang, B. & Lou, Z., May 1 2013, In: Journal of virology. 87, 10, p. 5755-5768 14 p.Research output: Contribution to journal › Article › peer-review
45 Scopus citations -
Detection and quantification of flavivirus NS5 methyl-transferase activities
Lim, S. P., Bodenreider, C. & Shi, P. Y., Jul 18 2013, Antiviral Methods and Protocols. p. 249-268 20 p. (Methods in Molecular Biology; vol. 1030).Research output: Chapter in Book/Report/Conference proceeding › Chapter
5 Scopus citations -
Development and characterization of a stable eGFP enterovirus 71 for antiviral screening
Shang, B., Deng, C., Ye, H., Xu, W., Yuan, Z., Shi, P. Y. & Zhang, B., Feb 2013, In: Antiviral research. 97, 2, p. 198-205 8 p.Research output: Contribution to journal › Article › peer-review
33 Scopus citations -
Difficulties and advancements in developing drugs for the treatment of dengue fever
Noble, C. G. & Shi, P. Y., 2013, In: Expert Opinion on Orphan Drugs. 1, 12, p. 947-949 3 p.Research output: Contribution to journal › Review article › peer-review
1 Scopus citations -
Inhibitors of HIV-1 attachment. Part 7: Indole-7-carboxamides as potent and orally bioavailable antiviral agents
Yeung, K. S., Qiu, Z., Xue, Q., Fang, H., Yang, Z., Zadjura, L., D'Arienzo, C. J., Eggers, B. J., Riccardi, K., Shi, P. Y., Gong, Y. F., Browning, M. R., Gao, Q., Hansel, S., Santone, K., Lin, P. F., Meanwell, N. A. & Kadow, J. F., Jan 1 2013, In: Bioorganic and Medicinal Chemistry Letters. 23, 1, p. 198-202 5 p.Research output: Contribution to journal › Article › peer-review
37 Scopus citations -
Inhibitors of HIV-1 attachment. Part 8: The effect of C7-heteroaryl substitution on the potency, and in vitro and in vivo profiles of indole-based inhibitors
Yeung, K. S., Qiu, Z., Yin, Z., Trehan, A., Fang, H., Pearce, B., Yang, Z., Zadjura, L., D'Arienzo, C. J., Riccardi, K., Shi, P. Y., Spicer, T. P., Gong, Y. F., Browning, M. R., Hansel, S., Santone, K., Barker, J., Coulter, T., Lin, P. F., Meanwell, N. A. & 1 others, , Jan 1 2013, In: Bioorganic and Medicinal Chemistry Letters. 23, 1, p. 203-208 6 p.Research output: Contribution to journal › Article › peer-review
29 Scopus citations -
Membrane topology and function of dengue virus NS2A protein
Xie, X., Gayen, S., Kang, C. B., Yuan, Z. & Shi, P. Y., Apr 2013, In: Journal of virology. 87, 8, p. 4609-4622 14 p.Research output: Contribution to journal › Article › peer-review
118 Scopus citations -
NMR analysis of a novel enzymatically active unlinked dengue NS2B-NS3 protease complex
Kim, Y. M., Gayen, S., Kang, C. B., Joy, J., Huang, Q., Chen, A. S., Wee, J. L. K., Ang, M. J. Y., Lim, H. A., Hung, A. W., Li, R., Noble, C. G., Lee, L. T., Yip, A., Wang, Q. Y., Chia, C. S. B., Hill, J., Shi, P. Y. & Keller, T. H., May 3 2013, In: Journal of Biological Chemistry. 288, 18, p. 12891-12900 10 p.Research output: Contribution to journal › Article › peer-review
69 Scopus citations -
Noninvasive bioluminescence imaging of dengue virus infection in the brain of A129 mice
Li, X. F., Deng, Y. Q., Zhao, H., Ye, Q., Wang, H. J., Li, S. H., Zhu, S. Y., Shi, P. Y., Qin, E. D., Zhang, B. & Qin, C. F., May 1 2013, In: Applied Microbiology and Biotechnology. 97, 10, p. 4589-4596 8 p.Research output: Contribution to journal › Article › peer-review
9 Scopus citations -
Rational design of a flavivirus vaccine by abolishing viral RNA 2′-O methylation
Li, S. H., Dong, H., Li, X. F., Xie, X., Zhao, H., Deng, Y. Q., Wang, X. Y., Ye, Q., Zhu, S. Y., Wang, H. J., Zhang, B., Leng, Q. B., Zuest, R., Qin, E. D., Qin, C. F. & Shi, P. Y., May 2013, In: Journal of virology. 87, 10, p. 5812-5819 8 p.Research output: Contribution to journal › Article › peer-review
67 Scopus citations -
Rational Design of a Live Attenuated Dengue Vaccine: 2′-O-Methyltransferase Mutants Are Highly Attenuated and Immunogenic in Mice and Macaques
Züst, R., Dong, H., Li, X. F., Chang, D. C., Zhang, B., Balakrishnan, T., Toh, Y. X., Jiang, T., Li, S. H., Deng, Y. Q., Ellis, B. R., Ellis, E. M., Poidinger, M., Zolezzi, F., Qin, C. F., Shi, P. Y. & Fink, K., Aug 2013, In: PLoS pathogens. 9, 8, e1003521.Research output: Contribution to journal › Article › peer-review
79 Scopus citations -
Report of the fifth symposium on emerging viral diseases
Zhang, B. & Shi, P. Y., Apr 2013, In: Virologica Sinica. 28, 2, p. 63-64 2 p.Research output: Contribution to journal › Editorial › peer-review
-
Ten years of dengue drug discovery: Progress and prospects
Lim, S. P., Wang, Q. Y., Noble, C. G., Chen, Y. L., Dong, H., Zou, B., Yokokawa, F., Nilar, S., Smith, P., Beer, D., Lescar, J. & Shi, P. Y., 2013, In: Antiviral research. 100, 2, p. 500-519 20 p.Research output: Contribution to journal › Review article › peer-review
241 Scopus citations -
Testing Antiviral Compounds in a Dengue Mouse Model
Schul, W., Yip, A. & Shi, P. Y., Jul 18 2013, Antiviral Methods and Protocols. p. 269-281 13 p. (Methods in Molecular Biology; vol. 1030).Research output: Chapter in Book/Report/Conference proceeding › Chapter
3 Scopus citations -
West Nile virus drug discovery
Lim, S. P. & Shi, P. Y., Dec 3 2013, In: Viruses. 5, 12, p. 2977-3006 30 p.Research output: Contribution to journal › Review article › peer-review
27 Scopus citations -
2015
A Crystal Structure of the Dengue Virus NS5 Protein Reveals a Novel Inter-domain Interface Essential for Protein Flexibility and Virus Replication
Zhao, Y., Soh, T. S., Zheng, J., Chan, K. W. K., Phoo, W. W., Lee, C. C., Tay, M. Y. F., Swaminathan, K., Cornvik, T. C., Lim, S. P., Shi, P. Y., Lescar, J., Vasudevan, S. G. & Luo, D., Mar 1 2015, In: PLoS pathogens. 11, 3, p. 1-27 27 p., e1004682.Research output: Contribution to journal › Article › peer-review
107 Scopus citations -
Characterization of Dengue virus NS4A and NS4B protein interaction
Zou, J., Xie, X., Wang, Q. Y., Dong, H., Lee, M. Y., Kang, C., Yuan, Z. & Shi, P. Y., 2015, In: Journal of virology. 89, 7, p. 3455-3470 16 p.Research output: Contribution to journal › Article › peer-review
70 Scopus citations -
Combined treatment of adenosine nucleoside inhibitor NITD008 and histone deacetylase inhibitor vorinostat represents an immunotherapy strategy to ameliorate West Nile virus infection
Nelson, J., Roe, K., Orillo, B., Shi, P. Y. & Verma, S., Oct 1 2015, In: Antiviral research. 122, p. 39-45 7 p., 3668.Research output: Contribution to journal › Article › peer-review
17 Scopus citations -
Determinants of dengue virus NS4A protein oligomerization
Lee, C. M., Xie, X., Zou, J., Li, S. H., Qi Lee, M. Y., Dong, H., Qin, C. F., Kang, C. & Shi, P. Y., 2015, In: Journal of virology. 89, 12, p. 6171-6183 13 p.Research output: Contribution to journal › Article › peer-review
24 Scopus citations -
Development of a stable Gaussia luciferase enterovirus 71 reporter virus
Xu, L. L., Shan, C., Deng, C. L., Li, X. D., Shang, B. D., Ye, H. Q., Liu, S. Q., Yuan, Z. M., Wang, Q. Y., Shi, P. Y. & Zhang, B., Jul 1 2015, In: Journal of Virological Methods. 219, p. 62-66 5 p.Research output: Contribution to journal › Article › peer-review
8 Scopus citations -
Discovery of dengue virus NS4B inhibitors
Wang, Q. Y., Dong, H., Zou, B., Karuna, R., Wan, K. F., Zou, J., Susila, A., Yip, A., Shan, C., Yeo, K. L., Xu, H., Ding, M., Chan, W. L., Gu, F., Seah, P. G., Liu, W., Lakshminarayana, S. B., Kang, C. B., Lescar, J., Blasco, F. & 2 others, , 2015, In: Journal of virology. 89, 16, p. 8233-8244 12 p.Research output: Contribution to journal › Article › peer-review
54 Scopus citations -
Drug discovery for the developing world: Progress at the Novartis Institute for Tropical Diseases
Jones, C. L., Yeung, B. K. S., Manjunatha, U., Shi, P. Y., Bodenreider, C. & Diagana, T. T., Jun 3 2015, In: Nature Reviews Drug Discovery. 14, 6, p. 442-444 3 p.Research output: Contribution to journal › Letter › peer-review
4 Scopus citations -
Flexibility of NS5 methyltransferase-polymerase linker region is essential for dengue virus replication
Zhao, Y., Soh, T. S., Chan, K. W. K., Fung, S. S. Y., Swaminathan, K., Lim, S. P., Shi, P. Y., Huber, T., Lescar, J., Luo, D. & Vasudevan, S. G., Jan 1 2015, In: Journal of virology. 89, 20, p. 10717-10721 5 p.Research output: Contribution to journal › Article › peer-review
28 Scopus citations -
Genetic interaction between NS4A and NS4B for replication of Japanese encephalitis virus
Li, X. D., Ye, H. Q., Deng, C. L., Liu, S. Q., Zhang, H. L., Shang, B. D., Shi, P. Y., Yuan, Z. M. & Zhang, B., 2015, In: Journal of General Virology. 96, p. 1264-1275 12 p.Research output: Contribution to journal › Article › peer-review
15 Scopus citations -
Genomic analysis and growth characteristic of dengue viruses from Makassar, Indonesia
Sasmono, R. T., Wahid, I., Trimarsanto, H., Yohan, B., Wahyuni, S., Hertanto, M., Yusuf, I., Mubin, H., Ganda, I. J., Latief, R., Bifani, P. J., Shi, P. Y. & Schreiber, M. J., Jun 1 2015, In: Infection, Genetics and Evolution. 32, p. 165-177 13 p.Research output: Contribution to journal › Article › peer-review
48 Scopus citations -
Identifying initiation and elongation inhibitors of dengue virus RNA polymerase in a high-throughput lead-finding campaign
Smith, T. M., Lim, S. P., Yue, K., Busby, S. A., Arora, R., Seh, C. C., Kirk Wright, S., Nutiu, R., Niyomrattanakit, P., Wan, K. F., Beer, D., Shi, P. Y. & Benson, T. E., Jan 30 2015, In: Journal of Biomolecular Screening. 20, 1, p. 153-163 11 p.Research output: Contribution to journal › Article › peer-review
20 Scopus citations -
Lead optimization of spiropyrazolopyridones: A new and potent class of dengue virus inhibitors
Zou, B., Chan, W. L., Ding, M., Leong, S. Y., Nilar, S., Seah, P. G., Liu, W., Karuna, R., Blasco, F., Yip, A., Chao, A., Susila, A., Dong, H., Wang, Q. Y., Xu, H. Y., Chan, K., Wan, K. F., Gu, F., Diagana, T. T., Wagner, T. & 3 others, , Mar 12 2015, In: ACS Medicinal Chemistry Letters. 6, 3, p. 344-348 5 p.Research output: Contribution to journal › Article › peer-review
35 Scopus citations -
Mapping the interactions between the NS4B and NS3 proteins of dengue virus
Zou, J., Lee, L. T., Wang, Q. Y., Xie, X., Lu, S., Yau, Y. H., Yuan, Z., Shochat, S. G., Kang, C., Lescar, J. & Shi, P. Y., Jan 1 2015, In: Journal of virology. 89, 7, p. 3471-3483 13 p.Research output: Contribution to journal › Article › peer-review
49 Scopus citations -
Molecular basis for specific viral RNA recognition and 2'-O-ribose methylation by the dengue virus nonstructural protein 5 (NS5)
Zhao, Y., Soh, T. S., Lim, S. P., Chung, K. Y., Swaminathan, K., Vasudevan, S. G., Shi, P. Y., Lescar, J. & Luo, D., Dec 1 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 48, p. 14834-14839 6 p.Research output: Contribution to journal › Article › peer-review
39 Scopus citations -
Secondary structure and membrane topology of dengue virus NS4B N-terminal 125 amino acids
Li, Y., Kim, Y. M., Zou, J., Wang, Q. Y., Gayen, S., Wong, Y. L., Lee, L. T., Xie, X., Huang, Q., Lescar, J., Shi, P. Y. & Kang, C., Dec 1 2015, In: Biochimica et Biophysica Acta - Biomembranes. 1848, 12, p. 3150-3157 8 p.Research output: Contribution to journal › Article › peer-review
21 Scopus citations -
Stabilization of dengue virus polymerase in de novo initiation assay provides advantages for compound screening
Niyomrattanakit, P., Wan, K. F., Chung, K. Y., Abas, S. N., Seh, C. C., Dong, H., Lim, C. C., Chao, A. T., Lee, C. B., Nilar, S., Lescar, J., Shi, P. Y., Beer, D. & Lim, S. P., Jul 1 2015, In: Antiviral research. 119, p. 36-46 11 p.Research output: Contribution to journal › Article › peer-review
13 Scopus citations -
Synergistic suppression of dengue virus replication using a combination of nucleoside analogs and nucleoside synthesis inhibitors
Yeo, K. L., Chen, Y. L., Xu, H. Y., Dong, H., Wang, Q. Y., Yokokawa, F. & Shi, P. Y., Apr 1 2015, In: Antimicrobial agents and chemotherapy. 59, 4, p. 2086-2093 8 p.Research output: Contribution to journal › Article › peer-review
39 Scopus citations -
Targeting dengue virus NS4B protein for drug discovery
Xie, X., Zou, J., Wang, Q. Y. & Shi, P. Y., Jun 2015, In: Antiviral research. 118, p. 39-45 7 p., 3603.Research output: Contribution to journal › Review article › peer-review
44 Scopus citations