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• Using SEQUEST with Theoretically Complete Sequence Databases

  Sadygov, R. G., Nov 1 2015, In: Journal of the American Society for Mass Spectrometry. 26, 11, p. 1858-1864 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Peptides
  • Databases
  • Protein Databases
  • Proteins
  • Chemical analysis
  4 Scopus citations

• Using reverse genetics to manipulate the NSs gene of the rift valley fever virus MP-12 strain to improve vaccine safety and efficacy

  Kalveram, B., Lihoradova, O., Indran, S. V. & Ikegami, T., Nov 2011, In: Journal of Visualized Experiments. 57, e3400.

  Research output: Contribution to journal › Article › peer-review

  • Interferons
  • Rift Valley fever virus
  • Vaccines
  • Genetics
  • Reverse Genetics
  23 Scopus citations

• Using recombination-dependent lethal mutations to stabilize reporter flaviviruses for rapid serodiagnosis and drug discovery

  Baker, C., Xie, X., Zou, J., Muruato, A., Fink, K. & Shi, P. Y., Jul 2020, In: EBioMedicine. 57, 102838.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Drug Discovery
  • Flavivirus
  • Viruses
  • Serologic Tests
  • Genetic Recombination
  4 Scopus citations

• Using next generation sequencing to study the genetic diversity of candidate live attenuated zika vaccines

  Collins, N. D., Shan, C., Nunes, B. T. D., Widen, S. G., Shi, P. Y., Barrett, A. D. T. & Sarathy, V. V., Apr 2020, In: Vaccines. 8, 2, 161.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Zika Virus
  • Attenuated Vaccines
  • Genetic Variation
  • Membranes
  • Flaviviridae
  1 Scopus citations

• Using multiple mini interviews as a pre-screening tool for medical student candidates completing international health electives

  Satterfield, C. A., Dacso, M. M. & Patel, P., Jan 1 2018, In: Medical education online. 23, 1, 1483694.

  Research output: Contribution to journal › Article › peer-review

  • medical student
  • candidacy
  • health
  • interview
  • student

• Using multiple data sources to answer patient safety-related research questions in hospital inpatient settings: A discursive paper using inpatient falls as an example

  Tzeng, H. M., Dec 2011, In: Journal of Clinical Nursing. 20, 23-24, p. 3276-3284 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Patient Safety
  • Information Storage and Retrieval
  • Inpatients
  • Accidental Falls
  • Datasets
  5 Scopus citations

• Using mass spectrometry to monitor monoclonal immunoglobulins in patients with a monoclonal gammopathy

  Barnidge, D. R., Dasari, S., Botz, C. M., Murray, D. H., Snyder, M. R., Katzmann, J. A., Dispenzieri, A. & Murray, D. L., Mar 7 2014, In: Journal of Proteome Research. 13, 3, p. 1419-1427 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Mass spectrometry
  • Paraproteinemias
  • Mass Spectrometry
  • Immunoglobulins
  • Molecular mass
  62 Scopus citations

• Using isothermal titration calorimetry to determine thermodynamic parameters of protein–glycosaminoglycan interactions

  Dutta, A. K., Rösgen, J. & Rajarathnam, K., 2015, In: Methods in Molecular Biology. 1229, p. 315-324 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Calorimetry
  • Thermodynamics
  • Entropy
  • Kinetics
  26 Scopus citations

• Using intervention mapping to develop “me & you: Building healthy relationships,” a healthy relationship intervention for early middle school Students

  Peskin, M. F., Markham, C. M., Gabay, E. K., Shegog, R., Cuccaro, P. M., Temple, J. R., Hernandez, B., Thiel, M. & Emery, S. T., Jan 1 2018, Adolescent Dating Violence: Theory, Research, and Prevention. Elsevier, p. 467-501 35 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Health Promotion
  • Students
  • Bass
  • Pregnancy in Adolescence
  • Empirical Research
  1 Scopus citations

• Using immunoproteomics to identify alpha-enolase as an autoantigen in liver fibrosis

  Peng, B., Huang, X., Nakayasu, E. S., Petersen, J. R., Qiu, S., Almeida, I. C. & Zhang, J. Y., Apr 5 2013, In: Journal of Proteome Research. 12, 4, p. 1789-1796 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Liver
  • Phosphopyruvate Hydratase
  • Autoantigens
  • Liver Cirrhosis
  • Autoantibodies
  19 Scopus citations

• Using High Throughput DNA Sequencing to Evaluate the Accuracy of Serial Dilution Based Tests of Microbial Activities in Oil Pipelines

  Khanipov, K., Golovko, G., Rojas, M., Pimenova, M., Albayrak, L., Chumakov, S., Duarte, R., Widger, W. R., Pickthall, T. & Fofanov, Y., May 16 2018, In: Unknown Journal.

  Research output: Contribution to journal › Article › peer-review

  • high-throughput nucleotide sequencing
  • High-Throughput Nucleotide Sequencing
  • Dilution
  • microbial activity
  • Oils

• Using free energy of binding calculations to improve the accuracy of virtual screening predictions

  Malmstrom, R. D. & Watowich, S. J., Jul 25 2011, In: Journal of Chemical Information and Modeling. 51, 7, p. 1648-1655 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Free energy
  • Screening
  • energy
  • Ligands
  • Molecules
  16 Scopus citations

• Using EMR to improve compliance with clinical practice guidelines for management of stable COPD

  Terasaki, J., Singh, G., Zhang, W., Wagner, P. & Sharma, G., Nov 2015, In: Respiratory Medicine. 109, 11, p. 1423-1429 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Practice Management
  • Electronic Health Records
  • Practice Guidelines
  • Chronic Obstructive Pulmonary Disease
  • Nebulizers and Vaporizers
  4 Scopus citations

• Using electronic biology based platform to predict flu vaccine efficacy for 2018/2019

  Veljkovic, V. & Paessler, S., 2018, In: F1000Research. 7, 298.

  Research output: Contribution to journal › Article › peer-review

  • Influenza Vaccines
  • Vaccines
  • Public health
  • Public Health
  • Viruses
  3 Scopus citations

• Using clinical and robotic assessment tools to examine the feasibility of pairing tDCS with upper extremity physical therapy in patients with stroke and TBI: A consideration-of-concept pilot study

  Middleton, A., Fritz, S. L., Liuzzo, D. M., Newman-Norlund, R. & Herter, T. M., 2014, In: NeuroRehabilitation. 35, 4, p. 741-754 14 p.

  Research output: Contribution to journal › Article › peer-review

  • Transcranial Direct Current Stimulation
  • Robotics
  • Upper Extremity
  • Stroke
  • Evaluation Studies
  24 Scopus citations

• Using click chemistry to measure the effect of viral infection on host-cell RNA synthesis

  Kalveram, B., Lihoradova, O., Indran, S. V., Head, J. A. & Ikegami, T., 2013, In: Journal of visualized experiments : JoVE. 78

  Research output: Contribution to journal › Article › peer-review

  • Click Chemistry
  • RNA
  • Viruses
  • Azides
  • 5-bromouridine
  8 Scopus citations

• Using circulating tumor cells to inform on prostate cancer biology and clinical utility

  Li, J., Gregory, S. G., Garcia-Blanco, M. A. & Armstrong, A. J., Jul 4 2015, In: Critical Reviews in Clinical Laboratory Sciences. 52, 4, p. 191-210 20 p.

  Research output: Contribution to journal › Review article › peer-review

  • Circulating Neoplastic Cells
  • Tumors
  • Cells
  • Prostatic Neoplasms
  • Biomarkers
  19 Scopus citations

• Using cervical length measurement for lower spontaneous preterm birth rates among women with threatened preterm labor

  Chiossi, G., Saade, G., Sibai, B. & Berghella, V., Jan 1 2018, In: Obstetrics and gynecology. 132, 1, p. 102-106 5 p.

  Research output: Contribution to journal › Review article › peer-review

  • Cervical Length Measurement
  • Birth Rate
  • Premature Obstetric Labor
  • Premature Birth
  • Fibronectins

• Using a virion assembly-defective dengue virus as a vaccine approach

  Shan, C., Xie, X., Zou, J., Züst, R., Zhang, B., Ambrose, R., Mackenzie, J., Fink, K. & Shi, P. Y., Nov 1 2018, In: Journal of virology. 92, 21, e01002.

  Research output: Contribution to journal › Article › peer-review

  • Defective Viruses
  • Dengue virus
  • Dengue Virus
  • virion
  • Virion
  10 Scopus citations

• Using an electronic activity monitor system as an intervention modality: A systematic review Health behavior, health promotion and society.

  Lewis, Z. H., Lyons, E. J., Jarvis, J. M. & Baillargeon, J., Jun 24 2015, In: BMC Public Health. 15, 1, 585.

  Research output: Contribution to journal › Article › peer-review

  • Health Behavior
  • Health Promotion
  • Systematic Reviews
  • Wearable Electronic Devices
  • Obesity
  100 Scopus citations

• Using a community-engaged approach to develop a bilingual survey about psychosocial stressors among individuals of mexican origin

  Symanski, E., Karpman, M., Jimenez, M., Lopez, D., Felknor, S. A., Upadhyaya, M., Strom, S. S. & Bondy, M. L., Nov 1 2015, In: Journal of Health Care for the Poor and Underserved. 26, 4, p. 1456-1471 16 p.

  Research output: Contribution to journal › Article › peer-review

  • Hypertension
  • Air Pressure
  • Air Pollution
  • Environmental Exposure
  • Focus Groups
  4 Scopus citations

• Using a 3D tool to document and determine graft loss: A mini-review and case report

  Benjamin, N. C., Wurzer, P., Voigt, C. D., Benjamin, D. A. & Herndon, D., 2015, (Accepted/In press) In: Burns.

  Research output: Contribution to journal › Article › peer-review

  • Transplants
  • Software
  • Wounds and Injuries
  • Burns
  • Austria
  3 Scopus citations

• US food and drug administration-Approved laboratory tests after caronia

  Allen, T. C., Nov 2013, In: Archives of Pathology and Laboratory Medicine. 137, 11, p. 1543-1544 2 p.

  Research output: Contribution to journal › Editorial › peer-review
  1 Scopus citations

• User satisfaction with lower limb wearable robotic exoskeletons

  Poritz, J. M. P., Taylor, H. B., Francisco, G. & Chang, S. H., Apr 1 2020, In: Disability and Rehabilitation: Assistive Technology. 15, 3, p. 322-327 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Exoskeleton Device
  • Exoskeleton (Robotics)
  • Lower Extremity
  • Robotics
  • Patient rehabilitation
  4 Scopus citations

• User evaluations offer promise for pod-intravaginal ring as a drug delivery platform: A mixed methods study of acceptability and use experiences

  Guthrie, K. M., Rosen, R. K., Vargas, S. E., Getz, M. L., Dawson, L., Guillen, M., Ramirez, J. J., Baum, M. M. & Vincent, K. L., May 2018, In: PloS one. 13, 5, e0197269.

  Research output: Contribution to journal › Article › peer-review

  • Drug Delivery Systems
  • Drug delivery
  • Pharmacokinetics
  • pods
  • HIV
  6 Scopus citations

• Use of weekly 4DCT-based ventilation maps to quantify changes in lung function for patients undergoing radiation therapy

  Vinogradskiy, Y. Y., Castillo, R., Castillo, E., Chandler, A., Martel, M. K. & Guerrero, T., Jan 2012, In: Medical Physics. 39, 1, p. 289-298 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Ventilation
  • Radiotherapy
  • Lung
  • Neoplasms
  • Tumor Burden
  49 Scopus citations

• Use of Ultrasonically Interdigitated Anchors in Haglund’s Deformity Correction Surgery

  Warren, B., Black, N., Linscheid, L., Panchbhavi, V. & Janney, C., 2020, (Accepted/In press) In: Foot and Ankle Specialist.

  Research output: Contribution to journal › Article › peer-review

  • Patient Reported Outcome Measures
  • Information Systems
  • Titanium
  • Walking
  • Suture Anchors

• Use of treponemal screening assay strength of signal to avoid unnecessary confirmatory testing

  Berry, G. J. & Loeffelholz, M. J., Nov 15 2016, In: Sexually Transmitted Diseases. 43, 12, p. 737-740 4 p.

  Research output: Contribution to journal › Article › peer-review

  • Treponema pallidum
  • Immunoassay
  • Agglutination
  • Syphilis
  • Agglutination Tests
  8 Scopus citations

• Use of the short physical performance battery and step monitoring to evaluate improvements after epidural steroid injections in an elderly patient

  Przkora, R., Fisher, S. R., Von Der Hoeh, N., Heyde, C. E., Dominguez, J. D., Maybauer, M. O. & Volpi, E., Jun 1 2015, In: Journal of Clinical Gerontology and Geriatrics. 6, 2, p. 68-70 3 p., 139.

  Research output: Contribution to journal › Article › peer-review

  • Epidural Injections
  • Physical Functional Performance
  • Steroids
  • Elderly
  • Spinal Stenosis
  1 Scopus citations

• Use of theoretical peptide distributions in phosphoproteome analysis

  Kalita, M., Kasumov, T., Brasier, A. R. & Sadygov, R. G., Jul 5 2013, In: Journal of Proteome Research. 12, 7, p. 3207-3214 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Proteomics
  • Peptides
  • Datasets
  • Mass spectrometers
  • Measurement errors
  1 Scopus citations

• Use of the informational spectrum methodology for rapid biological analysis of the novel coronavirus 2019-nCoV: Prediction of potential receptor, natural reservoir, tropism and therapeutic/vaccine target

  Veljkovic, V., Vergara-Alert, J., Segalés, J. & Paessler, S., 2020, In: F1000Research. 9, 52.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Severe Acute Respiratory Syndrome
  • Coronavirus
  • Tropism
  • Viruses
  • Vaccines
  14 Scopus citations

• Use of the ICD-10 vision codes to study ocular conditions in Medicare beneficiaries with stroke

  Hreha, K. P., Fisher, S. R., Reistetter, T. A., Ottenbacher, K., Haas, A., Li, C. Y., Ehrlich, J. R., Whitaker, D. B. & Whitson, H. E., Jul 8 2020, In: BMC Health Services Research. 20, 1, 628.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Medicare
  • International Classification of Diseases
  • Ocular Vision
  • Stroke
  • Eye
  1 Scopus citations

• Use of the American College of Surgeons NSQIP surgical risk calculator for laparoscopic colectomy: How good is it and how can we improve it?

  Cologne, K. G., Keller, D. S., Liwanag, L., Devaraj, B. & Senagore, A. J., Mar 1 2015, In: Journal of the American College of Surgeons. 220, 3, p. 281-286 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Colectomy
  • Surgeons
  • Length of Stay
  • Surgical Wound Infection
  • Operating Rooms
  49 Scopus citations

• Use of symptoms and risk factors to predict acute otitis media in infants

  McCormick, D. P., Jennings, K., Ede, L. C., Alvarez-Fernandez, P., Patel, J. & Chonmaitree, T., Feb 1 2016, In: International Journal of Pediatric Otorhinolaryngology. 81, p. 55-59 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Otitis Media
  • Respiratory Tract Infections
  • Earache
  • Cough
  • Parents
  9 Scopus citations

• Use of stimulants in operational settings: Issues and considerations

  Davenport, N., Lowry, C. & Pinkston, B., Jan 1 2012, Sleep Deprivation, Stimulant Medications, and Cognition. Cambridge University Press, p. 237-256 20 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Fatigue
  • Circadian Rhythm
  • United States Department of Defense
  • Jet Lag Syndrome
  • Sleep
  2 Scopus citations

• Use of Soluble Extracellular Regions of MmpL (SERoM) as Vaccines for Tuberculosis

  Strong, E. J. & West, N. P., Dec 1 2018, In: Scientific reports. 8, 1, 5604.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Tuberculosis Vaccines
  • Membrane Proteins
  • Tuberculosis
  • Mycobacterium bovis
  • Vaccines
  2 Scopus citations

• Use of small-angle X-ray scattering to investigate the structure and function of dengue virus NS3 and ns5

  Choi, K. H. & Morais, M., 2014, In: Methods in Molecular Biology. 1138, p. 241-252 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue Virus
  • X-Rays
  • Macromolecular Substances
  • Molecular Weight
  • Data Analysis
  1 Scopus citations

• Use of singular value decomposition analysis to differentiate phosphorylated precursors in strong cation exchange fractions

  Sadygov, R. G., Dec 1 2014, In: ELECTROPHORESIS. 35, 24, p. 3498-3503 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Singular value decomposition
  • Cations
  • Peptides
  • Phosphorylation
  • Eigenvalues and eigenfunctions
  5 Scopus citations

• Use of Sindbis/eastern equine encephalitis chimeric viruses in plaque reduction neutralization tests for arboviral disease diagnostics

  Johnson, B. W., Kosoy, O., Wang, E., Delorey, M., Russell, B., Bowen, R. A. & Weaver, S. C., Sep 2011, In: Clinical and Vaccine Immunology. 18, 9, p. 1486-1491 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Eastern equine encephalitis virus
  • Neutralization Tests
  • Viruses
  • Sindbis Virus
  • Alphavirus
  13 Scopus citations

• Use of self-expanding stents for better intracranial flow diverter wall apposition

  Kühn, A. L., Wakhloo, A. K., Gounis, M. J., Kan, P., De Macedo Rodrigues, K., Lozano, J. D., Marosfoi, M. G., Perras, M., Brooks, C., Howk, M. C., Rex, D. E., Massari, F. & Puri, A. S., Apr 2017, In: Interventional Neuroradiology. 23, 2, p. 129-136 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Stents
  • Equipment and Supplies
  • Aneurysm
  • nitinol
  • Cone-Beam Computed Tomography
  10 Scopus citations

• Use of reverse vaccinology in the design and construction of nanoglycoconjugate vaccines against burkholderia pseudomallei

  Muruato, L. A., Tapia, D., Hatcher, C. L., Kalita, M., Brett, P. J., Gregory, A. E., Samuel, J. E., Titball, R. W. & Torres, A. G., Nov 2017, In: Clinical and Vaccine Immunology. 24, 11, e00206-17.

  Research output: Contribution to journal › Article › peer-review

  • Vaccinology
  • Burkholderia pseudomallei
  • Glycoconjugates
  • Vaccines
  • Animals
  19 Scopus citations

• Use of reverse vaccinology in the design and construction of nanoglycoconjugate vaccines against burkholderia pseudomallei

  Muruato, L. A., Tapia, D., Hatcher, C. L., Kalita, M., Brett, P. J., Gregory, A. E., Samuel, J. E., Titball, R. W. & Torres, A., Jan 1 2017, In: Journal fur Kardiologie. 24, 11-12, p. 280-284 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Vaccinology
  • Burkholderia pseudomallei
  • Glycoconjugates
  • Vaccines
  • Melioidosis

• Use of patient navigators to increase HPV vaccination rates in a pediatric clinical population

  Berenson, A. B., Hirth, J. M., Kuo, Y. F., Starkey, J. M. & Rupp, R. E., Dec 2020, In: Preventive Medicine Reports. 20, 101194.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Patient Navigation
  • Vaccination
  • Papillomavirus Vaccines
  • Pediatrics
  • Population

• Use of parallel validation high-throughput screens to reduce false positives and identify novel dengue NS2B-NS3 protease inhibitors

  Tomlinson, S. M. & Watowich, S. J., Feb 1 2012, In: Antiviral research. 93, 2, p. 245-252 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue Virus
  • Dengue
  • Protease Inhibitors
  • Trypsin
  • West Nile virus
  37 Scopus citations

• Use of monitoring levels of soluble forms of cytokeratin 18 in the urine of patients with superficial bladder cancer following intravesical Ad-IFNα/Syn3 treatment in a phase l study

  Benedict, W. F., Fisher, M., Zhang, X. Q., Yang, Z., Munsell, M. F. & Dinney, C. N. P., Mar 2014, In: Cancer gene therapy. 21, 3, p. 91-94 4 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Keratin-18
  • Urinary Bladder Neoplasms
  • Interferons
  • Urine
  • Cell Death
  7 Scopus citations

• Use of mobile applications in neurosurgery: Are we compromising on patient confidentiality and privacy?

  Kalakoti, P., Sharma, K., Harsh, V., Haque, F. A. & Veeranki, S. P., Jul 1 2015, In: Neurology India. 63, 4, p. 641-642 2 p.

  Research output: Contribution to journal › Letter › peer-review
  2 Scopus citations

• Use of Japanese encephalitis vaccine in US travel medicine practices in Global TravEpiNet

  Global TravEpiNet Consortium, Oct 1 2014, In: American Journal of Tropical Medicine and Hygiene. 91, 4, p. 694-698 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Japanese Encephalitis Vaccines
  • Travel Medicine
  • Japanese Encephalitis
  • Clinical Decision-Making
  • Advisory Committees
  17 Scopus citations

• Use of impella ventricular assist device in patients with severe coronary artery disease presenting with cardiac arrest

  Mukku, V., Cai, Q., Gilani, S., Fujise, K. & Barbagelata, A., Sep 1 2012, In: International Journal of Angiology. 21, 3, p. 163-166 4 p.

  Research output: Contribution to journal › Review article › peer-review

  • Heart-Assist Devices
  • Heart Arrest
  • Coronary Artery Disease
  • Cardiogenic Shock
  • Perfusion
  16 Scopus citations

• Use of Imaging and Diagnostic Procedures After Low-Dose CT Screening for Lung Cancer

  Nishi, S. P. E., Zhou, J., Okereke, I., Kuo, Y. F. & Goodwin, J., Feb 2020, In: Chest. 157, 2, p. 427-434 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Diagnostic Imaging
  • Lung Neoplasms
  • Mediastinoscopy
  • Thoracoscopy
  • Bronchoscopy
  1 Scopus citations

• Use of HbA1c for diagnoses of diabetes and prediabetes: Comparison with diagnoses based on fasting and 2-Hr glucose values and effects of gender, race, and age

  Guo, F., Moellering, D. R. & Garvey, W. T., Jun 1 2014, In: Metabolic Syndrome and Related Disorders. 12, 5, p. 258-268 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Prediabetic State
  • Fasting
  • Glucose
  • Mexican Americans
  • Nutrition Surveys
  57 Scopus citations