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  Discovery of dengue virus NS4B inhibitors

  Wang, Q. Y., Dong, H., Zou, B., Karuna, R., Wan, K. F., Zou, J., Susila, A., Yip, A., Shan, C., Yeo, K. L., Xu, H., Ding, M., Chan, W. L., Gu, F., Seah, P. G., Liu, W., Lakshminarayana, S. B., Kang, C. B., Lescar, J., Blasco, F. & 2 others, Smith, P. W. & Shi, P. Y., 2015, In: Journal of virology. 89, 16, p. 8233-8244 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue virus
  • Dengue Virus
  • Inhibition (Psychology)
  • Amino Acids
  • Pharmaceutical Chemistry
  53 Scopus citations

• Dysregulation of Ephrin receptor and PPAR signaling pathways in neural progenitor cells infected by Zika virus

  Thulasi Raman, S. N., Latreille, E., Gao, J., Zhang, W., Wu, J., Russell, M. S., Walrond, L., Cyr, T., Lavoie, J. R., Safronetz, D., Cao, J., Sauve, S., Farnsworth, A., Chen, W., Shi, P. Y., Wang, Y., Wang, L., Rosu-Myles, M. & Li, X., Jan 1 2020, In: Emerging Microbes and Infections. 9, 1, p. 2046-2060 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Eph Family Receptors
  • Zika Virus
  • Neural Pathways
  • Microcephaly
  • Peroxisome Proliferator-Activated Receptors

• Enterovirus 71 VPg uridylation uses a two-molecular mechanism of 3D polymerase

  Sun, Y., Wang, Y., Shan, C., Chen, C., Xu, P., Song, M., Zhou, H., Yang, C., Xu, W., Shi, P. Y., Zhang, B. & Lou, Z., Dec 2012, In: Journal of virology. 86, 24, p. 13662-13671 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Enterovirus
  • Picornaviridae
  • RNA
  • mutation
  • Mutation
  32 Scopus citations

• Envelope protein ubiquitination drives entry and pathogenesis of Zika virus

  Giraldo, M. I., Xia, H., Aguilera-Aguirre, L., Hage, A., van Tol, S., Shan, C., Xie, X., Sturdevant, G. L., Robertson, S. J., McNally, K. L., Meade-White, K., Azar, S. R., Rossi, S. L., Maury, W., Woodson, M., Ramage, H., Johnson, J. R., Krogan, N. J., Morais, M. C., Best, S. M. & 2 others, Shi, P. Y. & Rajsbaum, R., Sep 17 2020, In: Nature. 585, 7825, p. 414-419 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Zika Virus
  • Ubiquitination
  • Virus Internalization
  • Polyubiquitin
  • Proteins
  6 Scopus citations

• Evaluation of a novel reporter virus neutralization test for serological diagnosis of Zika and Dengue virus infection

  Shan, C., Ortiz, D. A., Yang, Y., Wong, S. J., Kramer, L. D., Shi, P. Y., Loeffelholz, M. J. & Ren, P., Oct 2017, In: Journal of Clinical Microbiology. 55, 10, p. 3028-3036 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Zika Virus Infection
  • Zika Virus
  • Neutralization Tests
  • Dengue Virus
  • Viruses
  23 Scopus citations

• Evasion of Type I Interferon by SARS-CoV-2

  Xia, H., Cao, Z., Xie, X., Zhang, X., Chen, J. Y. C., Wang, H., Menachery, V. D., Rajsbaum, R. & Shi, P. Y., Oct 6 2020, In: Cell Reports. 33, 1, 108234.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Severe Acute Respiratory Syndrome
  • Coronavirus
  • Interferon Type I
  • Phosphorylation
  • Interferon Regulatory Factor-3
  19 Scopus citations

• Evolutionary enhancement of Zika virus infectivity in Aedes aegypti mosquitoes

  Liu, Y., Liu, J., Du, S., Shan, C., Nie, K., Zhang, R., Li, X. F., Zhang, R., Wang, T., Qin, C. F., Wang, P., Shi, P. Y. & Cheng, G., May 25 2017, In: Nature. 545, 7655, p. 482-486 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Zika Virus
  • Aedes
  • Culicidae
  • Proteins
  • Epidemics
  189 Scopus citations

• Flexibility of NS5 methyltransferase-polymerase linker region is essential for dengue virus replication

  Zhao, Y., Soh, T. S., Chan, K. W. K., Fung, S. S. Y., Swaminathan, K., Lim, S. P., Shi, P. Y., Huber, T., Lescar, J., Luo, D. & Vasudevan, S. G., Jan 1 2015, In: Journal of virology. 89, 20, p. 10717-10721 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue virus
  • Reverse Genetics
  • Dengue Virus
  • Methyltransferases
  • virus replication
  28 Scopus citations

• Fragile X mental retardation protein is a zika virus restriction factor that is antagonized by subgenomic flaviviral RNA

  Soto-Acosta, R., Xie, X., Shan, C., Baker, C. K., Shi, P. Y., Rossi, S. L., Garcia-Blanco, M. A. & Bradrick, S., Dec 1 2018, In: eLife. 7, e39023.

  Research output: Contribution to journal › Article › peer-review

  • Fragile X Mental Retardation Protein
  • Zika Virus
  • Viruses
  • RNA
  • Zika Virus Infection
  17 Scopus citations

• Functional Analysis of Glycosylation of Zika Virus Envelope Protein

  Fontes-Garfias, C. R., Shan, C., Luo, H., Muruato, A. E., Medeiros, D. B. A., Mays, E., Xie, X., Zou, J., Roundy, C. M., Wakamiya, M., Rossi, S. L., Wang, T., Weaver, S. C. & Shi, P. Y., Oct 31 2017, In: Cell Reports. 21, 5, p. 1180-1190 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Glycosylation
  • Viral Envelope Proteins
  • Zika Virus
  • Functional analysis
  • Viruses
  58 Scopus citations

• Functional analysis of two cavities in flavivirus NS5 polymerase

  Zou, G., Chen, Y. L., Dong, H., Lim, C. C., Yap, L. J., Yau, Y. H., Shochat, S. G., Lescar, J. & Shi, P. Y., Apr 22 2011, In: Journal of Biological Chemistry. 286, 16, p. 14362-14372 11 p.

  Research output: Contribution to journal › Article › peer-review

  • RNA Replicase
  • Functional analysis
  • Flavivirus
  • Dengue Virus
  • Viruses
  84 Scopus citations

• Generation and characterization of mouse monoclonal antibodies against NS4B protein of dengue virus

  Xie, X., Zou, J., Wang, Q. Y., Noble, C. G., Lescar, J. & Shi, P. Y., Feb 1 2014, In: Virology. 450-451, p. 250-257 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue virus NS4B protein
  • Monoclonal Antibodies
  • Epitopes
  • Proteins
  • Cytosol
  13 Scopus citations

• Generation and characterization of West Nile pseudo-infectious reporter virus for antiviral screening

  Zhang, H. L., Ye, H. Q., Deng, C. L., Liu, S. Q., Shi, P. Y., Qin, C. F., Yuan, Z. M. & Zhang, B., May 1 2017, In: Antiviral research. 141, p. 38-47 10 p.

  Research output: Contribution to journal › Article › peer-review

  • West Nile virus
  • Antiviral Agents
  • Viruses
  • Containment of Biohazards
  • Luciferases
  11 Scopus citations

• Genetic interaction between NS4A and NS4B for replication of Japanese encephalitis virus

  Li, X. D., Ye, H. Q., Deng, C. L., Liu, S. Q., Zhang, H. L., Shang, B. D., Shi, P. Y., Yuan, Z. M. & Zhang, B., 2015, In: Journal of General Virology. 96, p. 1264-1275 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Japanese Encephalitis Virus
  • Mutation
  • Viral Matrix Proteins
  • Viruses
  • Genetic Selection
  15 Scopus citations

• Genomic analysis and growth characteristic of dengue viruses from Makassar, Indonesia

  Sasmono, R. T., Wahid, I., Trimarsanto, H., Yohan, B., Wahyuni, S., Hertanto, M., Yusuf, I., Mubin, H., Ganda, I. J., Latief, R., Bifani, P. J., Shi, P. Y. & Schreiber, M. J., Jun 1 2015, In: Infection, Genetics and Evolution. 32, p. 165-177 13 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue virus
  • Indonesia
  • Dengue Virus
  • genotype
  • genomics
  47 Scopus citations

• Highly conserved residues in the helical domain of dengue virus type 1 precursor membrane protein are involved in assembly, precursor membrane (prM) protein cleavage, and entry

  Hsieh, S. C., Wu, Y. C., Zou, G., Nerurkar, V. R., Shi, P. Y. & Wang, W. K., Nov 28 2014, In: Journal of Biological Chemistry. 289, 48, p. 33149-33160 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue Virus
  • Viruses
  • Membranes
  • Membrane Proteins
  • Replicon
  23 Scopus citations

• High-Throughput Fitness Profiling of Zika Virus E Protein Reveals Different Roles for Glycosylation during Infection of Mammalian and Mosquito Cells

  Gong, D., Zhang, T. H., Zhao, D., Du, Y., Chapa, T. J., Shi, Y., Wang, L., Contreras, D., Zeng, G., Shi, P. Y., Wu, T. T., Arumugaswami, V. & Sun, R., Mar 23 2018, In: iScience. 1, p. 97-111 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Zika Virus
  • Culicidae
  • Glycosylation
  • Zika Virus Infection
  • Infection
  16 Scopus citations

• Human IFIT3 Modulates IFIT1 RNA Binding Specificity and Protein Stability

  Johnson, B., VanBlargan, L. A., Xu, W., White, J. P., Shan, C., Shi, P. Y., Zhang, R., Adhikari, J., Gross, M. L., Leung, D. W., Diamond, M. S. & Amarasinghe, G. K., Mar 20 2018, In: Immunity. 48, 3, p. 487-499.e5

  Research output: Contribution to journal › Article › peer-review

  • Protein Stability
  • RNA-Binding Proteins
  • RNA Caps
  • RNA
  • Methylation
  30 Scopus citations

• Identifying initiation and elongation inhibitors of dengue virus RNA polymerase in a high-throughput lead-finding campaign

  Smith, T. M., Lim, S. P., Yue, K., Busby, S. A., Arora, R., Seh, C. C., Kirk Wright, S., Nutiu, R., Niyomrattanakit, P., Wan, K. F., Beer, D., Shi, P. Y. & Benson, T. E., Jan 30 2015, In: Journal of Biomolecular Screening. 20, 1, p. 153-163 11 p.

  Research output: Contribution to journal › Article › peer-review

  • RNA Replicase
  • Dengue Virus
  • Viruses
  • Assays
  • DNA-Directed RNA Polymerases
  20 Scopus citations

• Identifying optimal capsid duplication length for the stability of reporter flaviviruses

  Baker, C., Liu, Y., Zou, J., Muruato, A., Xie, X. & Shi, P. Y., Jan 1 2020, In: Emerging Microbes and Infections. 9, 1, p. 2256-2265 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Flavivirus
  • Capsid
  • Zika Virus
  • Culicidae
  • Viruses

• Inhibition of coronavirus entry in vitro and ex vivo by a lipid-conjugated peptide derived from the sars-cov-2 spike glycoprotein hrc domain

  Outlaw, V. K., Bovier, F. T., Mears, M. C., Cajimat, M. N., Zhu, Y., Lin, M. J., Addetia, A., Lieberman, N. A. P., Peddu, V., Xie, X., Shi, P. Y., Greninger, A. L., Gellman, S. H., Bente, D. A., Moscona, A. & Porotto, M., Sep 1 2020, In: mBio. 11, 5, p. 1-14 14 p., e01935-20.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Severe Acute Respiratory Syndrome
  • Coronavirus
  • Glycoproteins
  • Lipopeptides
  • Lipids
  1 Scopus citations

• Inhibition of dengue virus by targeting viral NS4B protein

  Xie, X., Wang, Q. Y., Xu, H. Y., Qing, M., Kramer, L., Yuan, Z. & Shi, P. Y., Nov 2011, In: Journal of virology. 85, 21, p. 11183-11195 13 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue virus
  • Dengue Virus
  • viral proteins
  • Viral Proteins
  • Replicon
  92 Scopus citations

• Inhibition of dengue virus through suppression of host pyrimidine biosynthesis

  Wang, Q. Y., Bushell, S., Qing, M., Xu, H. Y., Bonavia, A., Nunes, S., Zhou, J., Poh, M. K., de Sessions, P. F., Niyomrattanakit, P., Dong, H., Hoffmaster, K., Goh, A., Nilar, S., Schul, W., Jones, S., Kramer, L., Compton, T. & Shi, P. Y., Jul 2011, In: Journal of virology. 85, 13, p. 6548-6556 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue virus
  • pyrimidine
  • Dengue Virus
  • dihydroorotate dehydrogenase
  • pyrimidines
  105 Scopus citations

• Inhibition of enterovirus 71 by adenosine analog NITD008

  Deng, C. L., Yeo, H., Ye, H. Q., Liu, S. Q., Shang, B. D., Gong, P., Alonso, S., Shi, P. Y. & Zhang, B., 2014, In: Journal of virology. 88, 20, p. 11915-11923 9 p.

  Research output: Contribution to journal › Article › peer-review

  • NITD008
  • Enterovirus
  • adenosine
  • Adenosine
  • Inhibition (Psychology)
  45 Scopus citations

• Inhibitors of HIV-1 attachment. Part 7: Indole-7-carboxamides as potent and orally bioavailable antiviral agents

  Yeung, K. S., Qiu, Z., Xue, Q., Fang, H., Yang, Z., Zadjura, L., D'Arienzo, C. J., Eggers, B. J., Riccardi, K., Shi, P. Y., Gong, Y. F., Browning, M. R., Gao, Q., Hansel, S., Santone, K., Lin, P. F., Meanwell, N. A. & Kadow, J. F., Jan 1 2013, In: Bioorganic and Medicinal Chemistry Letters. 23, 1, p. 198-202 5 p.

  Research output: Contribution to journal › Article › peer-review

  • indole
  • HIV-1
  • Antiviral Agents
  • Pharmacokinetics
  • Amides
  37 Scopus citations

• Inhibitors of HIV-1 attachment. Part 8: The effect of C7-heteroaryl substitution on the potency, and in vitro and in vivo profiles of indole-based inhibitors

  Yeung, K. S., Qiu, Z., Yin, Z., Trehan, A., Fang, H., Pearce, B., Yang, Z., Zadjura, L., D'Arienzo, C. J., Riccardi, K., Shi, P. Y., Spicer, T. P., Gong, Y. F., Browning, M. R., Hansel, S., Santone, K., Barker, J., Coulter, T., Lin, P. F., Meanwell, N. A. & 1 others, Kadow, J. F., Jan 1 2013, In: Bioorganic and Medicinal Chemistry Letters. 23, 1, p. 203-208 6 p.

  Research output: Contribution to journal › Article › peer-review

  • indole
  • Rats
  • Assays
  • Substitution reactions
  • HIV-1
  29 Scopus citations

• Internally deleted WNV genomes isolated from exotic birds in New Mexico: Function in cells, mosquitoes, and mice

  Pesko, K. N., Fitzpatrick, K. A., Ryan, E. M., Shi, P. Y., Zhang, B., Lennon, N. J., Newman, R. M., Henn, M. R. & Ebel, G. D., May 25 2012, In: Virology. 427, 1, p. 10-17 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Culicidae
  • Birds
  • Genome
  • 4-(2-(4-isopropylbenzamido)ethoxy)benzoic acid
  • Population
  24 Scopus citations

• In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age

  Lieberman, N. A. P., Peddu, V., Xie, H., Shrestha, L., Huang, M. L., Mears, M. C., Cajimat, M. N., Bente, D. A., Shi, P. Y., Bovier, F., Roychoudhury, P., Jerome, K. R., Moscona, A., Porotto, M. & Greninger, A. L., Sep 2020, In: PLoS Biology. 18, 9, e3000849.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Severe acute respiratory syndrome coronavirus
  • Severe Acute Respiratory Syndrome
  • Coronavirus
  • viral load
  • Viral Load
  9 Scopus citations

• K48-linked polyubiquitination of dengue virus NS1 protein inhibits its interaction with the viral partner NS4B

  Giraldo, M. I., Vargas-Cuartas, O., Gallego-Gomez, J. C., Shi, P. Y., Padilla-Sanabria, L., Castaño-Osorio, J. C. & Rajsbaum, R., Feb 15 2018, In: Virus Research. 246, p. 1-11 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue Virus
  • Dengue
  • Proteins
  • Ubiquitination
  • Viral Proteins
  8 Scopus citations

• Keratinocytes are cell targets of west nile virus in vivo

  Lim, P. Y., Behr, M. J., Chadwick, C. M., Shi, P. Y. & Bernard, K. A., May 2011, In: Journal of virology. 85, 10, p. 5197-5201 5 p.

  Research output: Contribution to journal › Article › peer-review

  • West Nile virus
  • keratinocytes
  • Keratinocytes
  • Skin
  • cells
  75 Scopus citations

• Lead optimization of spiropyrazolopyridones: A new and potent class of dengue virus inhibitors

  Zou, B., Chan, W. L., Ding, M., Leong, S. Y., Nilar, S., Seah, P. G., Liu, W., Karuna, R., Blasco, F., Yip, A., Chao, A., Susila, A., Dong, H., Wang, Q. Y., Xu, H. Y., Chan, K., Wan, K. F., Gu, F., Diagana, T. T., Wagner, T. & 3 others, Dix, I., Shi, P. Y. & Smith, P. W., Mar 12 2015, In: ACS Medicinal Chemistry Letters. 6, 3, p. 344-348 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue Virus
  • Viruses
  • Lead
  • Enantiomers
  • Pharmacokinetics
  35 Scopus citations

• Ligand-bound structures of the dengue virus protease reveal the active conformation

  Noble, C. G., Seh, C. C., Chao, A. T. & Shi, P. Y., Jan 2012, In: Journal of virology. 86, 1, p. 438-446 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue virus
  • Dengue Virus
  • ligands
  • Peptide Hydrolases
  • proteinases
  166 Scopus citations

• Mapping the interactions between the NS4B and NS3 proteins of dengue virus

  Zou, J., Lee, L. T., Wang, Q. Y., Xie, X., Lu, S., Yau, Y. H., Yuan, Z., Shochat, S. G., Kang, C., Lescar, J. & Shi, P. Y., Jan 1 2015, In: Journal of virology. 89, 7, p. 3471-3483 13 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue virus NS4B protein
  • flavivirus NS3 protein
  • Dengue virus
  • Flavivirus
  • Dengue Virus
  48 Scopus citations

• Membrane topology and function of dengue virus NS2A protein

  Xie, X., Gayen, S., Kang, C. B., Yuan, Z. & Shi, P. Y., Apr 2013, In: Journal of virology. 87, 8, p. 4609-4622 14 p.

  Research output: Contribution to journal › Article › peer-review

  • virus protein 2A
  • Dengue virus
  • Dengue Virus
  • topology
  • Flavivirus
  116 Scopus citations

• Modulation of inflammation and pathology during dengue virus infection by p38 MAPK inhibitor SB203580

  Fu, Y., Yip, A., Seah, P. G., Blasco, F., Shi, P. Y. & Hervé, M., Jan 1 2014, In: Antiviral research. 110, p. 151-157 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Severe Dengue
  • SB 203580
  • Dengue Virus
  • Protein Kinase Inhibitors
  • p38 Mitogen-Activated Protein Kinases
  24 Scopus citations

• Molecular basis for specific viral RNA recognition and 2'-O-ribose methylation by the dengue virus nonstructural protein 5 (NS5)

  Zhao, Y., Soh, T. S., Lim, S. P., Chung, K. Y., Swaminathan, K., Vasudevan, S. G., Shi, P. Y., Lescar, J. & Luo, D., Dec 1 2015, In: Proceedings of the National Academy of Sciences of the United States of America. 112, 48, p. 14834-14839 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Ribose
  • Dengue Virus
  • Viral RNA
  • Methylation
  • Flavivirus
  39 Scopus citations

• NMR analysis of a novel enzymatically active unlinked dengue NS2B-NS3 protease complex

  Kim, Y. M., Gayen, S., Kang, C. B., Joy, J., Huang, Q., Chen, A. S., Wee, J. L. K., Ang, M. J. Y., Lim, H. A., Hung, A. W., Li, R., Noble, C. G., Lee, L. T., Yip, A., Wang, Q. Y., Chia, C. S. B., Hill, J., Shi, P. Y. & Keller, T. H., May 3 2013, In: Journal of Biological Chemistry. 288, 18, p. 12891-12900 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Nuclear magnetic resonance
  • Dengue
  • Peptide Hydrolases
  • Dengue Virus
  • Viruses
  69 Scopus citations

• Nonconsensus west nile virus genomes arising during mosquito infection suppress pathogenesis and modulate virus fitness in vivo

  Ebel, G. D., Fitzpatrick, K. A., Lim, P. Y., Bennett, C. J., Deardorff, E. R., Kramer, G. V. S. J., Zhou, Y., Shi, P. Y. & Bernard, K. A., Dec 2011, In: Journal of virology. 85, 23, p. 12605-12613 9 p.

  Research output: Contribution to journal › Article › peer-review

  • West Nile virus
  • Culicidae
  • pathogenesis
  • RNA helicases
  • RNA Helicases
  19 Scopus citations

• Noninvasive bioluminescence imaging of dengue virus infection in the brain of A129 mice

  Li, X. F., Deng, Y. Q., Zhao, H., Ye, Q., Wang, H. J., Li, S. H., Zhu, S. Y., Shi, P. Y., Qin, E. D., Zhang, B. & Qin, C. F., May 1 2013, In: Applied Microbiology and Biotechnology. 97, 10, p. 4589-4596 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue Virus
  • Virus Diseases
  • Brain
  • Antiviral Agents
  • Renilla Luciferases
  9 Scopus citations

• NS5 from dengue virus serotype 2 can adopt a conformation analogous to that of its zika virus and Japanese encephalitis virus homologues

  El Sahili, A., Soh, T. S., Schiltz, J., Gharbi-Ayachi, A., Seh, C. C., Shi, P. Y., Lim, S. P. & Lescar, J., Jan 1 2020, In: Journal of virology. 94, 1, e01294-19.

  Research output: Contribution to journal › Article › peer-review

  • Zika virus
  • Japanese encephalitis virus
  • Japanese Encephalitis Virus
  • Zika Virus
  • Dengue virus
  5 Scopus citations

• Overlapping and distinct molecular determinants dictating the antiviral activities of TRIM56 against flaviviruses and coronavirus

  Liu, B., Li, N. L., Wang, J., Shi, P. Y., Wang, T., Miller, M. A. & Li, K., 2014, In: Journal of virology. 88, 23, p. 13821-13835 15 p.

  Research output: Contribution to journal › Article › peer-review

  • Flaviviridae
  • Coronavirinae
  • Flavivirus
  • Coronavirus
  • Human Coronavirus OC43
  40 Scopus citations

• Peli1 facilitates virus replication and promotes neuroinflammation during West Nile virus infection

  Luo, H., Winkelmann, E. R., Zhu, S., Ru, W., Mays, E., Silvas, J. A., Vollmer, L. L., Gao, J., Peng, B. H., Bopp, N. E., Cromer, C., Shan, C., Xie, G., Li, G., Tesh, R., Popov, V. L., Shi, P. Y., Sun, S. C., Wu, P., Klein, R. S. & 4 others, Tang, S. J., Zhang, W., Aguilar, P. V. & Wang, T., Nov 1 2018, In: Journal of Clinical Investigation. 128, 11, p. 4980-4991 12 p.

  Research output: Contribution to journal › Article › peer-review

  • West Nile Fever
  • West Nile virus
  • Microglia
  • Virus Replication
  • Encephalitis
  11 Scopus citations

• Peli1 signaling blockade attenuates congenital zika syndrome

  Luo, H., Li, G., Wang, B., Tian, B., Gao, J., Zou, J., Shi, S., Zhu, S., Peng, B. H., Adam, A., Martinez, A., Hein, K., Winkelmann, E. R., Mahmoud, Y., Zhou, X., Shan, C., Rossi, S., Weaver, S., Barrett, A. D. T., Sun, S. C. & 4 others, Zhang, W., Shi, P. Y., Wu, P. & Wang, T., Jun 2020, In: PLoS pathogens. 16, 6, e1008538.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Zika Virus
  • Trophoblasts
  • Flavivirus
  • Cell Death
  • Zika Virus Infection
  1 Scopus citations

• Phase I/II study of COVID-19 RNA vaccine BNT162b1 in adults

  Mulligan, M. J., Lyke, K. E., Kitchin, N., Absalon, J., Gurtman, A., Lockhart, S., Neuzil, K., Raabe, V., Bailey, R., Swanson, K. A., Li, P., Koury, K., Kalina, W., Cooper, D., Fontes-Garfias, C., Shi, P. Y., Türeci, Ö., Tompkins, K. R., Walsh, E. E., Frenck, R. & 5 others, Falsey, A. R., Dormitzer, P. R., Gruber, W. C., Şahin, U. & Jansen, K. U., Oct 22 2020, In: Nature. 586, 7830, p. 589-593 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Coronavirus
  • Severe Acute Respiratory Syndrome
  • Vaccines
  • RNA
  • Messenger RNA
  73 Scopus citations

• Point mutations in the West Nile virus (Flaviviridae; Flavivirus) RNA-dependent RNA polymerase alter viral fitness in a host-dependent manner in vitro and in vivo

  Van Slyke, G. A., Ciota, A. T., Willsey, G. G., Jaeger, J., Shi, P. Y. & Kramer, L. D., May 25 2012, In: Virology. 427, 1, p. 18-24 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Flaviviridae
  • RNA Replicase
  • West Nile virus
  • Flavivirus
  • Point Mutation
  21 Scopus citations

• Rational design of a flavivirus vaccine by abolishing viral RNA 2′-O methylation

  Li, S. H., Dong, H., Li, X. F., Xie, X., Zhao, H., Deng, Y. Q., Wang, X. Y., Ye, Q., Zhu, S. Y., Wang, H. J., Zhang, B., Leng, Q. B., Zuest, R., Qin, E. D., Qin, C. F. & Shi, P. Y., May 2013, In: Journal of virology. 87, 10, p. 5812-5819 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Flavivirus
  • Viral RNA
  • methylation
  • Methylation
  • vaccines
  67 Scopus citations

• Rational Design of a Live Attenuated Dengue Vaccine: 2′-O-Methyltransferase Mutants Are Highly Attenuated and Immunogenic in Mice and Macaques

  Züst, R., Dong, H., Li, X. F., Chang, D. C., Zhang, B., Balakrishnan, T., Toh, Y. X., Jiang, T., Li, S. H., Deng, Y. Q., Ellis, B. R., Ellis, E. M., Poidinger, M., Zolezzi, F., Qin, C. F., Shi, P. Y. & Fink, K., Aug 2013, In: PLoS pathogens. 9, 8, e1003521.

  Research output: Contribution to journal › Article › peer-review

  • Dengue Vaccines
  • Attenuated Vaccines
  • Methyltransferases
  • Macaca
  • Viruses
  79 Scopus citations

• Recovery of a chemically synthesized Japanese encephalitis virus reveals two critical adaptive mutations in NS2B and NS4A

  Li, X. D., Li, X. F., Ye, H. Q., Deng, C. L., Ye, Q., Shan, C., Shang, B. D., Xu, L. L., Li, S. H., Cao, S. B., Yuan, Z. M., Shi, P. Y., Qin, C. F. & Zhang, B., 2014, In: Journal of General Virology. 95, PART 4, p. 806-815 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Japanese Encephalitis Virus
  • Mutation
  • Viruses
  • Clone Cells
  • Nucleic Acid Databases
  27 Scopus citations

• Resistance analysis of an antibody that selectively inhibits dengue virus serotype-1

  Zou, G., Kukkaro, P., Lok, S. M., Ng, J. K. W., Tan, G. K., Hanson, B. J., Alonso, S., MacAry, P. A. & Shi, P. Y., Sep 1 2012, In: Antiviral research. 95, 3, p. 216-223 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Dengue Virus
  • Serogroup
  • Antibodies
  • Viral Envelope Proteins
  • Viruses
  11 Scopus citations

• Role of microglia in the dissemination of zika virus from mother to fetal brain

  Xu, P., Shan, C., Dunn, T. J., Xie, X., Xia, H., Gao, J., Labastida, J. A., Zou, J., Villarreal, P. P., Schlagal, C. R., Yu, Y., Vargas, G., Rossi, S. L., Vasilakis, N., Shi, P. Y., Weaver, S. C. & Wu, P., Jul 2020, In: PLoS neglected tropical diseases. 14, 7, p. 1-21 21 p., e0008413.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Zika Virus
  • Yolk Sac
  • Microglia
  • Zika Virus Infection
  • Microcephaly
  2 Scopus citations