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  Transcriptional Profiling in Experimental Visceral Leishmaniasis Reveals a Broad Splenic Inflammatory Environment that Conditions Macrophages toward a Disease-Promoting Phenotype

  Kong, F., Saldarriaga, O. A., Spratt, H., Osorio, E. Y., Travi, B. L., Luxon, B. A. & Melby, P. C., Jan 2017, In: PLoS pathogens. 13, 1, e1006165.

  Research output: Contribution to journal › Article › peer-review
  36 Scopus citations

• Transcriptional Profiling of mRNA Expression in the Mouse Distal Colon

  Hoogerwerf, W. A., Sinha, M., Conesa, A., Luxon, B. A., Shahinian, V. B., Cornélissen, G., Halberg, F., Bostwick, J., Timm, J. & Cassone, V. M., Dec 2008, In: Gastroenterology. 135, 6, p. 2019-2029 11 p.

  Research output: Contribution to journal › Article › peer-review
  76 Scopus citations

• Transcriptional profiling of murine organ genes in response to infection with Bacillus anthracis Ames spores

  Moen, S. T., Yeager, L. A., Lawrence, W. S., Ponce, C., Galindo, C. L., Garner, H. R., Baze, W. B., Suarez, G., Peterson, J. & Chopra, A. K., Apr 2008, In: Microbial Pathogenesis. 44, 4, p. 293-310 18 p.

  Research output: Contribution to journal › Article › peer-review
  9 Scopus citations

• Transcriptional profiling of Rickettsia prowazekii coding and non-coding transcripts during in vitro host-pathogen and vector-pathogen interactions

  Schroeder, C. L. C., Narra, H. P., Sahni, A., Khanipov, K., Patel, J., Fofanov, Y. & Sahni, S. K., Oct 2017, In: Ticks and Tick-borne Diseases. 8, 6, p. 827-836 10 p.

  Research output: Contribution to journal › Article › peer-review
  14 Scopus citations

• Transcriptional profiling of spinal cord injury-induced central neuropathic pain

  Nesic, O., Lee, J., Johnson, K. M., Ye, Z., Xu, G. Y., Unabia, G. C., Wood, T. G., McAdoo, D. J., Westlund, K. N., Hulsebosch, C. E. & Perez-Polo, J. R., Nov 2005, In: Journal of neurochemistry. 95, 4, p. 998-1014 17 p.

  Research output: Contribution to journal › Article › peer-review
  122 Scopus citations

• Transcriptional profiling of the spleen in progressive visceral leishmaniasis reveals mixed expression of type 1 and type 2 cytokine-responsive genes

  Espitia, C. M., Saldarriaga, O. A., Travi, B. L., Osorio, E. Y., Hernandez, A., Band, M., Patel, M. J., Medina, A. A., Cappello, M., Pekosz, A. & Melby, P. C., Nov 26 2014, In: BMC Immunology. 15, 1, 38.

  Research output: Contribution to journal › Article › peer-review
  9 Scopus citations

• Transcriptional Regulation of Angiotensinogen Gene Expression

  Brasier, A. R., Han, Y. & Sherman, C. T., 1997, In: Vitamins and Hormones. 57, C, p. 217-247 31 p.

  Research output: Contribution to journal › Article › peer-review
  22 Scopus citations

• Transcriptional regulation of hepatic angiotensinogen gene expression by the acute-phase response

  Ron, D., Brasier, A. R. & Habener, J. F., Dec 21 1990, In: Molecular and Cellular Endocrinology. 74, 3, p. C97-C104

  Research output: Contribution to journal › Article › peer-review
  43 Scopus citations

• Transcriptional regulation of human inducible nitric oxide synthase gene in an intestinal epithelial cell line

  Linn, S. C., Morelli, P. J., Edry, I., Cottongim, S. E., Szabó, C. & Salzman, A. L., Jun 1997, In: American Journal of Physiology - Gastrointestinal and Liver Physiology. 272, 6 35-6, p. G1499-G1508

  Research output: Contribution to journal › Article › peer-review
  86 Scopus citations

• Transcriptional regulation of inflammatory mediators secreted by human colonic circular smooth muscle cells

  Shi, X. Z. & Sarna, S. K., Aug 2005, In: American Journal of Physiology - Gastrointestinal and Liver Physiology. 289, 2 52-2, p. G274-G284

  Research output: Contribution to journal › Article › peer-review
  47 Scopus citations

• Transcriptional regulation of the BCL-X gene by NF-κB is an element of hypoxic responses in the rat brain

  Glasgow, J. N., Qiu, J. X., Rassin, D., Grafe, M., Wood, T. & Perez-Polo, J. R., 2001, In: Neurochemical Research. 26, 6, p. 647-659 13 p., 344958.

  Research output: Contribution to journal › Article › peer-review
  55 Scopus citations

• Transcriptional stochasticity in gene expression

  Lipniacki, T., Paszek, P., Marciniak-Czochra, A., Brasier, A. R. & Kimmel, M., Jan 21 2006, In: Journal of Theoretical Biology. 238, 2, p. 348-367 20 p.

  Research output: Contribution to journal › Article › peer-review
  92 Scopus citations

• Transcriptional trans activation by human immunodeficiency virus type 1 Tat requires specific coactivators that are not basal factors

  Suñé, C. & García-Blanco, M. A., May 1995, In: Journal of virology. 69, 5, p. 3098-3107 10 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  35 Scopus citations

• Transcription by single molecules of RNA polymerase observed by light microscopy

  Schafer, D. A., Gelles, J., Sheetz, M. P. & Landick, R., 1991, In: Nature. 352, 6334, p. 444-448 5 p.

  Research output: Contribution to journal › Article › peer-review
  227 Scopus citations

• Transcription coupled base excision repair in mammalian cells: So little is known and so much to uncover

  Chakraborty, A., Tapryal, N., Islam, A., Mitra, S. & Hazra, T., Nov 2021, In: DNA Repair. 107, 103204.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Transcription elongation regulator 1 (TCERG1) regulates competent RNA polymerase II-mediated elongation of HIV-1 transcription and facilitates efficient viral replication

  Coiras, M., Montes, M., Montanuy, I., López-Huertas, M. R., Mateos, E., Le Sommer, C., Garcia-Blanco, M. A., Hernández-Munain, C., Alcamí, J. & Suñé, C., Oct 28 2013, In: Retrovirology. 10, 1, 124.

  Research output: Contribution to journal › Article › peer-review
  11 Scopus citations

• Transcription factor IRF-1 in kidney transplants mediates resistance to graft necrosis during rejection

  Afrouzian, M., Ramassar, V., Urmson, J., Zhu, L. F. & Halloran, P. F., 2002, In: Journal of the American Society of Nephrology. 13, 5, p. 1199-1209 11 p.

  Research output: Contribution to journal › Article › peer-review
  17 Scopus citations

• Transcription factors Atf1 and Sty1 promote stress tolerance under nitrosative stress in Schizosaccharomyces pombe

  Kar, P., Biswas, P., Patra, S. K. & Ghosh, S., Jan 2018, In: Microbiological Research. 206, p. 82-90 9 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  6 Scopus citations

• Transcription factors modulating angiotensinogen gene expression in hepatocytes

  Brasier, A. R., Li, J. & Copland, A., Dec 1994, In: Kidney International. 46, 6, p. 1564-1566 3 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  26 Scopus citations

• Transcription factor STE12α has distinct roles in morphogenesis, virulence, and ecological fitness of the primary pathogenic yeast Cryptococcus gattii

  Ren, P., Springer, D. J., Behr, M. J., Samsonoff, W. A., Chaturvedi, S. & Chaturvedi, V., Jul 2006, In: Eukaryotic Cell. 5, 7, p. 1065-1080 16 p.

  Research output: Contribution to journal › Article › peer-review
  33 Scopus citations

• Transcription factor TFIIH and DNA endonuclease Rad2 constitute yeast nucleotide excision repair factor 3: Implications for nucleotide excision repair and Cockayne syndrome

  Habraken, Y., Sung, P., Prakash, S. & Prakash, L., Oct 1 1996, In: Proceedings of the National Academy of Sciences of the United States of America. 93, 20, p. 10718-10722 5 p.

  Research output: Contribution to journal › Article › peer-review
  45 Scopus citations

• Transcription of genes encoding iron and heme acquisition proteins of Haemophilus influenzae during acute otitis media

  Whitby, P. W., Sim, K. E., Morton, D. J., Patel, J. A. & Stull, T. L., 1997, In: Infection and immunity. 65, 11, p. 4696-4700 5 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  25 Scopus citations

• Transcription of the Rickettsia Felis OmpA gene in naturally infected fleas

  Zavala-Castro, J. E., Small, M., Keng, C., Bouyer, D. H., Zavala-Velázquez, J. & Walker, D. H., Oct 2005, In: American Journal of Tropical Medicine and Hygiene. 73, 4, p. 662-666 5 p.

  Research output: Contribution to journal › Article › peer-review
  15 Scopus citations

• Transcription polymerase-catalyzed emergence of novel RNA replicons

  Jain, N., Blauch, L. R., Szymanski, M. R., Das, R., Tang, S. K. Y., Yin, Y. W. & Fire, A. Z., Apr 10 2020, In: Science. 368, 6487, eaay0688.

  Research output: Contribution to journal › Article › peer-review
  10 Scopus citations

• Transcription profiles of Streptococcus pneumoniae grown under different conditions of normal gravitation

  Allen, C. A., Galindo, C. L., Pandya, U., Watson, D. A., Chopra, A. K. & Niesel, D., Feb 2007, In: Acta Astronautica. 60, 4-7 SPEC. ISS., p. 433-444 12 p.

  Research output: Contribution to journal › Article › peer-review
  15 Scopus citations

• Transcription yield of fully 2'-modified RNA can be increased by the addition of thermostabilizing mutations to T7 RNA polymerase mutants

  Meyer, A. J., Garry, D. J., Hall, B., Byrom, M. M., McDonald, H. G., Yang, X., Yin, Y. W. & Ellington, A. D., Jul 7 2015, In: Nucleic acids research. 43, 15, p. 7480-7488 9 p.

  Research output: Contribution to journal › Article › peer-review
  38 Scopus citations

• Transcript levels of the Saccharomyces cerevisiae DNA repair gene RAD18 increase in UV irradiated cells and during meiosis but not during the mitotic cell cycle

  Jones, J. S. & Prakash, L., Feb 25 1991, In: Nucleic acids research. 19, 4, p. 893-898 6 p.

  Research output: Contribution to journal › Article › peer-review
  39 Scopus citations

• Transcript levels of the Saccharomyes cerevisiae DNA repair gene RAD23 increase in response to UV light andin meiosis but remain constant in the mitotic cell cycle

  Madura, K. & Prakash, S., Aug 25 1990, In: Nucleic acids research. 18, 16, p. 4737-4742 6 p.

  Research output: Contribution to journal › Article › peer-review
  55 Scopus citations

• Transcriptome Analysis of Buds and Leaves Using 454 Pyrosequencing to Discover Genes Associated with the Biosynthesis of Active Ingredients in Lonicera japonica Thunb

  He, L., Xu, X., Li, Y., Li, C., Zhu, Y., Yan, H., Sun, Z., Sun, C., Song, J., Bi, Y., Shen, J., Cheng, R., Wang, Z., Xiao, W. & Chen, S., Apr 25 2013, In: PLoS One. 8, 4, e62922.

  Research output: Contribution to journal › Article › peer-review
  44 Scopus citations

• Transcriptome analysis of circulating immune cell subsets highlight the role of monocytes in Zaire Ebola Virus Makona pathogenesis

  Menicucci, A. R., Versteeg, K., Woolsey, C., Mire, C. E., Geisbert, J. B., Cross, R. W., Agans, K. N., Jankeel, A., Geisbert, T. W. & Messaoudi, I., Oct 4 2017, In: Frontiers in immunology. 8, OCT, 1372.

  Research output: Contribution to journal › Article › peer-review
  30 Scopus citations

• Transcriptome analysis of the Ophiocordyceps sinensis fruiting body reveals putative genes involved in fruiting body development and cordycepin biosynthesis

  Xiang, L., Li, Y., Zhu, Y., Luo, H., Li, C., Xu, X., Sun, C., Song, J., Shi, L., He, L., Sun, W. & Chen, S., Jan 1 2014, In: Genomics. 103, 1, p. 154-159 6 p.

  Research output: Contribution to journal › Article › peer-review
  65 Scopus citations

• Transcriptome analysis reveals ginsenosides biosynthetic genes, microRNAs and simple sequence repeats in Panax ginseng C. A. Meyer

  Li, C., Zhu, Y., Guo, X., Sun, C., Luo, H., Song, J., Li, Y., Wang, L., Qian, J. & Chen, S., Apr 11 2013, In: BMC Genomics. 14, 1, 245.

  Research output: Contribution to journal › Article › peer-review
  113 Scopus citations

• Transcriptome Profiling of Peripheral Blood Cells Identifies Potential Biomarkers for Doxorubicin Cardiotoxicity in a Rat Model

  Todorova, V. K., Beggs, M. L., Delongchamp, R. R., Dhakal, I., Makhoul, I., Wei, J. Y. & Klimberg, V. S., Nov 27 2012, In: PloS one. 7, 11, e48398.

  Research output: Contribution to journal › Article › peer-review

  Open Access
  28 Scopus citations

• Transcriptomic analysis links hepatocellular carcinoma (HCC) in HZE ion irradiated mice to a human HCC subtype with favorable outcomes

  Ding, L. H., Yu, Y., Edmondson, E. F., Weil, M. M., Pop, L. M., McCarthy, M., Ullrich, R. & Story, M. D., Dec 2021, In: Scientific reports. 11, 1, 14052.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic analysis reveals early signs of liver toxicity in female MRL +/+ mice exposed to the acylating chemicals dichloroacetyl chloride and dichloroacetic anhydride

  König, R., Cai, P., Guo, X. & Ansari, G. A. S., Mar 2008, In: Chemical Research in Toxicology. 21, 3, p. 572-582 11 p.

  Research output: Contribution to journal › Article › peer-review
  8 Scopus citations

• Transcriptomic and innate immune responses to Yersinia pestis in the lymph node during bubonic plague

  Comer, J. E., Sturdevant, D. E., Carmody, A. B., Virtaneva, K., Gardner, D., Long, D., Rosenke, R., Porcella, S. F. & Hinnebusch, B. J., Dec 2010, In: Infection and immunity. 78, 12, p. 5086-5098 13 p.

  Research output: Contribution to journal › Article › peer-review
  44 Scopus citations

• Transcriptomic expression of AMPA receptor subunits and their auxiliary proteins in the human brain

  Shen, K. & Limon, A., Jun 11 2021, In: Neuroscience Letters. 755, 135938.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomics of environmental enrichment reveals a role for retinoic acid signaling in addiction

  Zhang, Y., Kong, F., Crofton, E. J., Dragosljvich, S. N., Sinha, M., Li, D., Fan, X., Koshy, S., Hommel, J. D., Spratt, H. M., Luxon, B. A. & Green, T. A., Nov 16 2016, In: Frontiers in Molecular Neuroscience. 9, NOV2016, 119.

  Research output: Contribution to journal › Article › peer-review
  22 Scopus citations

• Transcultural diabetes care in the United States – A position statement by the American Association of Clinical Endocrinologists

  Mechanick, J. I., Adams, S., Davidson, J. A., Fergus, I. V., Galindo, R. J., McKinney, K. H., Petak, S. M., Sadhu, A. R., Samson, S. L., Vedanthan, R. & Umpierrez, G. E., Jul 2019, In: Endocrine Practice. 25, 7, p. 729-765 37 p.

  Research output: Contribution to journal › Article › peer-review
  8 Scopus citations

• Transcutaneous bilirubin estimation in extremely low birth weight infants receiving phototherapy: A prospective observational study

  Bhargava, V., Tawfik, D., Niebuhr, B. & Jain, S. K., Jul 10 2018, In: BMC Pediatrics. 18, 1, 227.

  Research output: Contribution to journal › Article › peer-review
  5 Scopus citations

• Transcutaneous electrical nerve stimulation (TENS) improves upper GI symptoms and balances the sympathovagal activity in scleroderma patients

  Sallam, H., McNearney, T. A., Doshi, D. & Chen, J. D. Z., May 2007, In: Digestive Diseases and Sciences. 52, 5, p. 1329-1337 9 p.

  Research output: Contribution to journal › Article › peer-review
  46 Scopus citations

• Transcutaneously refillable, 3D-printed biopolymeric encapsulation system for the transplantation of endocrine cells

  Farina, M., Chua, C. Y. X., Ballerini, A., Thekkedath, U., Alexander, J. F., Rhudy, J. R., Torchio, G., Fraga, D., Pathak, R. R., Villanueva, M., Shin, C. S., Niles, J. A., Sesana, R., Demarchi, D., Sikora, A. G., Acharya, G. S., Gaber, A. O., Nichols, J. E. & Grattoni, A., Sep 2018, In: Biomaterials. 177, p. 125-138 14 p.

  Research output: Contribution to journal › Article › peer-review
  26 Scopus citations

• Transdermal fentanyl improves management of postoperative hemorrhoidectomy pain

  Kilbride, M., Morse, M. & Senagore, A., Nov 1 1994, In: Diseases of the Colon & Rectum. 37, 11, p. 1070-1072 3 p.

  Research output: Contribution to journal › Article › peer-review
  49 Scopus citations

• Transdisciplinary service delivery in school environments: Some limitations

  Ottenbacher, K., 1983, In: Physical and Occupational Therapy in Pediatrics. 3, 4, p. 9-16 8 p.

  Research output: Contribution to journal › Article › peer-review
  2 Scopus citations

• Transduction of Human Islets with Pseudotyped Lentiviral Vectors

  Kobinger, G. P., Deng, S., Louboutin, J. P., Vatamaniuk, M., Matschinsky, F., Markmann, J. F., Raper, S. E. & Wilson, J. M., Feb 2004, In: Human Gene Therapy. 15, 2, p. 211-219 9 p.

  Research output: Contribution to journal › Article › peer-review
  27 Scopus citations

• Transduction of human neural progenitor cells using recombinant adeno-associated viral vectors

  Wu, P., Ye, Y. & Svendsen, C. N., 2002, In: Gene Therapy. 9, 4, p. 245-255 11 p.

  Research output: Contribution to journal › Article › peer-review
  48 Scopus citations

• Transduction of human neural progenitor cells using recombinant adeno-associated viral vectors

  Wu, P., Ye, Y. & Svendsen, C. N., 2002, In: Gene Therapy. 9, 4, p. 245-255 11 p.

  Research output: Contribution to journal › Article › peer-review

• Transduction of satellite cells after prenatal intramuscular administration of lentiviral vectors

  MacKenzie, T. C., Kobinger, G. P., Louboutin, J. P., Radu, A., Javazon, E. H., Sena-Esteves, M., Wilson, J. M. & Flake, A. W., Jan 2005, In: Journal of Gene Medicine. 7, 1, p. 50-58 9 p.

  Research output: Contribution to journal › Article › peer-review
  33 Scopus citations

• Transection of Omohyoid Muscle as an Aid During Vagus Nerve Stimulator Implantation

  Guillet, J., Jenkins, P. & Giller, C., Mar 1 2017, In: World Neurosurgery. 99, p. 118-121 4 p.

  Research output: Contribution to journal › Article › peer-review

• Transendothelial migration of leukocytes carrying infectious HIV-1: An indicator of adverse prognosis

  Birdsall, H. H., Siwak, E. B., Trial, J. A., Rodriguez-Barradas, M., White, A. C., Wietgrefe, S. & Rossen, R. D., Jan 4 2002, In: AIDS. 16, 1, p. 5-12 8 p.

  Research output: Contribution to journal › Article › peer-review
  9 Scopus citations