Abstract
We show that an Ng bridge function modified version of the three-dimensional reference interaction site model (3D-RISM-NgB) solvation free energy method can accurately predict the hydration free energy (HFE) of a set of 504 organic molecules. To achieve this, a single unique constant parameter was adjusted to the computed HFE of single atom Lennard-Jones solutes. It is shown that 3D-RISM is relatively accurate at predicting the electrostatic component of the HFE without correction but requires a modification of the nonpolar contribution that originates in the formation of the cavity created by the solute in water. We use a free energy functional with the Ng scaling of the direct correlation function [Ng, K. C. J. Chem. Phys. 1974, 61, 2680]. This produces a rapid, reliable small molecule HFE calculation for applications in drug design.
| Original language | English (US) |
|---|---|
| Pages (from-to) | 934-941 |
| Number of pages | 8 |
| Journal | Journal of Chemical Theory and Computation |
| Volume | 10 |
| Issue number | 3 |
| DOIs | |
| State | Published - Mar 11 2014 |
ASJC Scopus subject areas
- Computer Science Applications
- Physical and Theoretical Chemistry
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