A novel multifunctional β-N-acetylhexosaminidase revealed through metagenomics of an oil-spilled mangrove

  • Fábio Lino Soares
  • , Joelma Marcon
  • , Michele de Cássia Pereira E Silva
  • , Nittaya Khakhum
  • , Louise Teixeira Cerdeira
  • , Júlia Ronzella Ottoni
  • , Daniela Ferreira Domingos
  • , Rodrigo Gouvea Taketani
  • , Valéria Maia de Oliveira
  • , André Oliveira de Souza Lima
  • , João Lucio Azevedo
  • , Jorge Luiz Mazza Rodrigues
  • , Fernando Dini Andreote

Research output: Contribution to journalArticlepeer-review

Abstract

The use of culture-independent approaches, such as metagenomics, provides complementary access to environmental microbial diversity. Mangrove environments represent a highly complex system with plenty of opportunities for finding singular functions. In this study we performed a functional screening of fosmid libraries obtained from an oil contaminated mangrove site, with the purpose of identifying clones expressing hydrolytic activities. A novel gene coding for a β-N-acetylhexosaminidase with 355 amino acids and 43KDa was retrieved and characterized. The translated sequence showed only 38% similarity to a β-N-acetylhexosaminidase gene in the genome of Veillonella sp. CAG:933, suggesting that it might constitute a novel enzyme. The enzyme was expressed, purified, and characterized for its enzymatic activity on carboxymethyl cellulose, p-Nitrophenyl-2acetamide-2deoxy-β-D-glucopyranoside, p-Nitrophenyl-2acetamide-2deoxy-β-D-galactopyranoside, and 4-Nitrophenyl β-D-glucopyranoside, presenting β-N-acetylglucosaminidase, β-glucosidase, and β-1,4-endoglucanase activities. The enzyme showed optimum activity at 30 C and pH 5.5. The characterization of the putative novel β-N-acetylglucosaminidase enzyme reflects similarities to characteristics of the environment explored, which differs from milder conditions environments. This work exemplifies the application of cultivation-independent molecular techniques to the mangrove microbiome for obtaining a novel biotechnological product.

Original languageEnglish (US)
Article number62
JournalBioengineering
Volume4
Issue number3
DOIs
StatePublished - Sep 2017

Keywords

  • 3D modeling
  • Bioprospection
  • Enzyme characterization
  • Hydrolases
  • Microbial communities

ASJC Scopus subject areas

  • Bioengineering

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