Abstract
The use of culture-independent approaches, such as metagenomics, provides complementary access to environmental microbial diversity. Mangrove environments represent a highly complex system with plenty of opportunities for finding singular functions. In this study we performed a functional screening of fosmid libraries obtained from an oil contaminated mangrove site, with the purpose of identifying clones expressing hydrolytic activities. A novel gene coding for a β-N-acetylhexosaminidase with 355 amino acids and 43KDa was retrieved and characterized. The translated sequence showed only 38% similarity to a β-N-acetylhexosaminidase gene in the genome of Veillonella sp. CAG:933, suggesting that it might constitute a novel enzyme. The enzyme was expressed, purified, and characterized for its enzymatic activity on carboxymethyl cellulose, p-Nitrophenyl-2acetamide-2deoxy-β-D-glucopyranoside, p-Nitrophenyl-2acetamide-2deoxy-β-D-galactopyranoside, and 4-Nitrophenyl β-D-glucopyranoside, presenting β-N-acetylglucosaminidase, β-glucosidase, and β-1,4-endoglucanase activities. The enzyme showed optimum activity at 30 ◦ C and pH 5.5. The characterization of the putative novel β-N-acetylglucosaminidase enzyme reflects similarities to characteristics of the environment explored, which differs from milder conditions environments. This work exemplifies the application of cultivation-independent molecular techniques to the mangrove microbiome for obtaining a novel biotechnological product.
| Original language | English (US) |
|---|---|
| Article number | 62 |
| Journal | Bioengineering |
| Volume | 4 |
| Issue number | 3 |
| DOIs | |
| State | Published - Sep 2017 |
Keywords
- 3D modeling
- Bioprospection
- Enzyme characterization
- Hydrolases
- Microbial communities
ASJC Scopus subject areas
- Bioengineering
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