TY - JOUR
T1 - A single amino acid substitution in the C terminus of OmpR alters DNA recognition and phosphorylation
AU - Tran, Van K.
AU - Oropeza, Ricardo
AU - Kenney, Linda J.
N1 - Funding Information:
We thank Lilo Barofsky, Oregon State University for MALDI-tof mass spectrometry, Charlotte Head for OmpR purification and for her assistance with V203M purification; Kirsten Mattison and Xiuhong Feng for their comments on the manuscript. We thank Andrew Townsend for help preparing Figure 2 , Richard Goodman for use of the fluorimeter and the Molecular Microbiology & Immunology Core Facility for DNA sequencing. We are grateful to Tom Silhavy, Phil Matsumura, Ann Stock, Robert Bourret and Richard Brennan for helpful discussions, and to Jack H. Kaplan for thoughtful comments on the manuscript. L.J.K. is grateful to B. Wanner, P. Youderian, N. Francis, and E. Markin for discussions somewhere on the road to Cacahuamilpa. This work was supported by grants MCB-9904658 and Americas Award MCB-9513275 from the National Science Foundation and GM58746 from the National Institutes of Health to L.J.K.
PY - 2000/6/23
Y1 - 2000/6/23
N2 - In bacteria and lower eukaryotes, adaptation to changes in the environment is often mediated by two-component regulatory systems. Such systems provide the basis for chemotaxis, nitrogen and phosphate regulation and adaptation to osmotic stress, for example. In Escherichia coli, the sensor kinase EnvZ detects a change in the osmotic environment and phosphorylates the response regulator OmpR. Phospho-OmpR binds to the regulatory regions of the porin genes ompF and ompC, and alters their expression. Recent evidence suggests that OmpR functions as a global regulator, regulating additional genes besides the porin genes. In this study, we have characterized a previously isolated OmpR2 mutant (V203M) that constitutively activates ompF and fails to express ompC. Because the substitution was located in the C-terminal DNA-binding domain, it had been assumed that the substitution would not affect phosphorylation of the N-terminal domain of OmpR. Our results indicate that this substitution completely eliminates phosphorylation by a small phosphate donor, acetyl phosphate, but not phosphorylation by the kinase EnvZ. The mutant OmpR has altered dephosphorylation kinetics and altered binding affinities to both ompF and ompC sites compared to the wild-type. Thus, a single amino acid substitution in the C-terminal DNA-binding domain has dramatic effects on the N-terminal phosphorylation domain. Most strikingly, we have identified a single base change in the OmpR binding site of ompC that restores high-affinity binding activity by the mutant. We interpret our results in the context of a model for porin gene expression. (C) 2000 Academic Press.
AB - In bacteria and lower eukaryotes, adaptation to changes in the environment is often mediated by two-component regulatory systems. Such systems provide the basis for chemotaxis, nitrogen and phosphate regulation and adaptation to osmotic stress, for example. In Escherichia coli, the sensor kinase EnvZ detects a change in the osmotic environment and phosphorylates the response regulator OmpR. Phospho-OmpR binds to the regulatory regions of the porin genes ompF and ompC, and alters their expression. Recent evidence suggests that OmpR functions as a global regulator, regulating additional genes besides the porin genes. In this study, we have characterized a previously isolated OmpR2 mutant (V203M) that constitutively activates ompF and fails to express ompC. Because the substitution was located in the C-terminal DNA-binding domain, it had been assumed that the substitution would not affect phosphorylation of the N-terminal domain of OmpR. Our results indicate that this substitution completely eliminates phosphorylation by a small phosphate donor, acetyl phosphate, but not phosphorylation by the kinase EnvZ. The mutant OmpR has altered dephosphorylation kinetics and altered binding affinities to both ompF and ompC sites compared to the wild-type. Thus, a single amino acid substitution in the C-terminal DNA-binding domain has dramatic effects on the N-terminal phosphorylation domain. Most strikingly, we have identified a single base change in the OmpR binding site of ompC that restores high-affinity binding activity by the mutant. We interpret our results in the context of a model for porin gene expression. (C) 2000 Academic Press.
KW - Osmoregulation
KW - Response regulator
KW - Signal transduction
KW - Two-component regulatory system
KW - Winged helix-turn-helix
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U2 - 10.1006/jmbi.2000.3809
DO - 10.1006/jmbi.2000.3809
M3 - Article
C2 - 10873450
AN - SCOPUS:0034705327
SN - 0022-2836
VL - 299
SP - 1257
EP - 1270
JO - Journal of Molecular Biology
JF - Journal of Molecular Biology
IS - 5
ER -