Accelerated epigenetic aging in brain is associated with pre-mortem HIV-associated neurocognitive disorders

Andrew J. Levine, Austin Quach, David J. Moore, Cristian L. Achim, Virawudh Soontornniyomkij, Eliezer Masliah, Elyse J. Singer, Benjamin Gelman, Natasha Nemanim, Steve Horvath

Research output: Contribution to journalArticle

34 Citations (Scopus)

Abstract

HIV infection leads to age-related conditions in relatively young persons. HIV-associated neurocognitive disorders (HAND) are considered among the most prevalent of these conditions. To study the mechanisms underlying this disorder, researchers need an accurate method for measuring biological aging. Here, we apply a recently developed measure of biological aging, based on DNA methylatlinical and Translational Science Instituteion, to the study of biological aging in HIV+ brains. Retrospective analysis of tissue bank specimens and pre-mortem data was carried out. Fifty-eight HIV+ adults underwent a medical and neurocognitive evaluation within 1 year of death. DNA was obtained from occipital cortex and analyzed with the Illumina Infinium Human Methylation 450K platform. Biological age determined via the epigenetic clock was contrasted with chronological age to obtain a measure of age acceleration, which was then compared between those with HAND and neurocognitively normal individuals. The HAND and neurocognitively normal groups did not differ with regard to demographic, histologic, neuropathologic, or virologic variables. HAND was associated with accelerated aging relative to neurocognitively normal individuals, with average relative acceleration of 3.5 years. Age acceleration did not correlate with pre-mortem neurocognitive functioning or HAND severity. This is the first study to demonstrate that the epigenetic age of occipital cortex samples is associated with HAND status in HIV+ individuals pre-mortem. While these results suggest that the increased risk of a neurocognitive disorder due to HIV might be mediated by an epigenetic aging mechanism, future studies will be needed to validate the findings and dissect causal relationships and downstream effects.

Original languageEnglish (US)
Pages (from-to)366-375
Number of pages10
JournalJournal of NeuroVirology
Volume22
Issue number3
DOIs
StatePublished - Jun 1 2016

Fingerprint

Epigenomics
HIV
Brain
Occipital Lobe
Neurocognitive Disorders
Tissue Banks
DNA
Methylation
HIV Infections
Research Personnel
Demography

Keywords

  • Epigenetic
  • Epigenetic clock
  • HANA
  • HAND
  • HIV
  • HIV-associated neurocognitive disorder

ASJC Scopus subject areas

  • Virology
  • Clinical Neurology
  • Cellular and Molecular Neuroscience
  • Neurology

Cite this

Levine, A. J., Quach, A., Moore, D. J., Achim, C. L., Soontornniyomkij, V., Masliah, E., ... Horvath, S. (2016). Accelerated epigenetic aging in brain is associated with pre-mortem HIV-associated neurocognitive disorders. Journal of NeuroVirology, 22(3), 366-375. https://doi.org/10.1007/s13365-015-0406-3

Accelerated epigenetic aging in brain is associated with pre-mortem HIV-associated neurocognitive disorders. / Levine, Andrew J.; Quach, Austin; Moore, David J.; Achim, Cristian L.; Soontornniyomkij, Virawudh; Masliah, Eliezer; Singer, Elyse J.; Gelman, Benjamin; Nemanim, Natasha; Horvath, Steve.

In: Journal of NeuroVirology, Vol. 22, No. 3, 01.06.2016, p. 366-375.

Research output: Contribution to journalArticle

Levine, AJ, Quach, A, Moore, DJ, Achim, CL, Soontornniyomkij, V, Masliah, E, Singer, EJ, Gelman, B, Nemanim, N & Horvath, S 2016, 'Accelerated epigenetic aging in brain is associated with pre-mortem HIV-associated neurocognitive disorders', Journal of NeuroVirology, vol. 22, no. 3, pp. 366-375. https://doi.org/10.1007/s13365-015-0406-3
Levine, Andrew J. ; Quach, Austin ; Moore, David J. ; Achim, Cristian L. ; Soontornniyomkij, Virawudh ; Masliah, Eliezer ; Singer, Elyse J. ; Gelman, Benjamin ; Nemanim, Natasha ; Horvath, Steve. / Accelerated epigenetic aging in brain is associated with pre-mortem HIV-associated neurocognitive disorders. In: Journal of NeuroVirology. 2016 ; Vol. 22, No. 3. pp. 366-375.
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