Analysis of dhiedral angle variability in related protein structures

Shekhar C. Mande, Ashwani Kumar, Payel Ghosh

Research output: Chapter in Book/Report/Conference proceedingChapter

Abstract

Similarity or variability of protein structures is usually measured by superposition of structures and then assessed by root mean square deviation of the superposed main chain atoms. The relationship between equivalent main chain atoms (or Cα atoms) and the variability in their dihedral angles has been assessed in this work. Proteins with identical sequences (or point mutants), those with homologous structures, and those whose structures have been determined by NMR were used to assess such relationship.

Original languageEnglish (US)
Title of host publicationBiomolecular Forms and Functions
Subtitle of host publicationA Celebration of 50 Years of the Ramachandran Map
PublisherWorld Scientific Publishing Co.
Pages107-115
Number of pages9
ISBN (Electronic)9789814449144
ISBN (Print)9789814449137
DOIs
StatePublished - Jan 1 2012
Externally publishedYes

ASJC Scopus subject areas

  • Biochemistry, Genetics and Molecular Biology(all)

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