Skip to main navigation Skip to search Skip to main content

Computing H/D-exchange speeds of single residues from data of peptic fragments

  • Ernst Althaus
  • , Stefan Canzar
  • , Mark R. Emmett
  • , Andreas Karrenbauer
  • , Alan G. Marshall
  • , Anke Meyer-Baese
  • , Huimin Zhang

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Determining the hydrogen-deuterium exchange speeds of single residues from data for peptic fragments obtained by FT-ICS MS is currently mainly done by manual interpretation. We provide an automated method based on combinatorial optimization. More precisely, we present an algorithm that enumerates all possible exchange speeds for single residues that explain the observed data of the peptic fragments.

Original languageEnglish (US)
Title of host publicationProceedings of the 23rd Annual ACM Symposium on Applied Computing, SAC'08
PublisherAssociation for Computing Machinery
Pages1273-1277
Number of pages5
ISBN (Print)9781595937537
DOIs
StatePublished - 2008
Externally publishedYes
Event23rd Annual ACM Symposium on Applied Computing, SAC 2008 - Fortaleza, Ceara, Brazil
Duration: Mar 16 2008Mar 20 2008

Publication series

NameProceedings of the ACM Symposium on Applied Computing

Conference

Conference23rd Annual ACM Symposium on Applied Computing, SAC 2008
Country/TerritoryBrazil
CityFortaleza, Ceara
Period3/16/083/20/08

ASJC Scopus subject areas

  • Software

Fingerprint

Dive into the research topics of 'Computing H/D-exchange speeds of single residues from data of peptic fragments'. Together they form a unique fingerprint.

Cite this