TY - JOUR
T1 - Geometric Diagrams of Genomes
T2 - constructing a visual grammar for 3D genomics
AU - Molins-Pitarch, Carla
AU - Khao, Jonathan
AU - Bonet, Santiago
AU - Justicia, Yolanda
AU - Altube, Clementina
AU - Goodstadt, Mike
AU - Ribot, Francesc
AU - Aiden, Erez Lieberman
AU - Neretti, Nicola
AU - McGill, Gaël G.
AU - Marti-Renom, Marc A.
N1 - Publisher Copyright:
© The Author(s) 2025.
PY - 2025/12
Y1 - 2025/12
N2 - Advances in the field of three-dimensional (3D) genomics have revealed an ever-expanding array of architectural features that were unknown only a few years ago. Just as ribbon diagrams integrate spatial and symbolic representation to communicate the shape of a protein, the representation of genomes in 3D space requires the development and use of new cartographic symbols and visual conventions. Here, we propose a conceptualized grammar that makes it easier to create visual 3D representations of genomes.
AB - Advances in the field of three-dimensional (3D) genomics have revealed an ever-expanding array of architectural features that were unknown only a few years ago. Just as ribbon diagrams integrate spatial and symbolic representation to communicate the shape of a protein, the representation of genomes in 3D space requires the development and use of new cartographic symbols and visual conventions. Here, we propose a conceptualized grammar that makes it easier to create visual 3D representations of genomes.
UR - https://www.scopus.com/pages/publications/105009206797
UR - https://www.scopus.com/pages/publications/105009206797#tab=citedBy
U2 - 10.1186/s13059-025-03646-y
DO - 10.1186/s13059-025-03646-y
M3 - Article
C2 - 40571947
AN - SCOPUS:105009206797
SN - 1474-7596
VL - 26
JO - Genome Biology
JF - Genome Biology
IS - 1
M1 - 181
ER -