High-resolution x-ray structure and functional analysis of the murine norovirus 1 capsid protein protruding domain

Stefan Taube, John R. Rubin, Umesh Katpally, Thomas Smith, Ann Kendall, Jeanne A. Stuckey, Christiane E. Wobus

Research output: Contribution to journalArticle

52 Citations (Scopus)

Abstract

Murine noroviruses (MNV) are closely related to the human noroviruses (HuNoV), which cause the majority of nonbacterial gastroenteritis. Unlike HuNoV, MNV grow in culture and in a small-animal model that represents a tractable model to study norovirus biology. To begin a detailed investigation of molecular events that occur during norovirus binding to cells, the crystallographic structure of the murine orovirus 1 (MNV-1) capsid protein protruding (P) domain has been determined. Crystallization of the bacterially expressed protein yielded two different crystal forms (Protein Data Bank identifiers [PDB ID], 3LQ6 and 3LQE). Comparison of the structures indicated a large degree of structural mobility in loops on the surface of the P2 subdomain. Specifically, the A′-B′ and E′-F′ loops were found in open and closed conformations. These regions of high mobility include the known escape mutation site for the neutralizing antibody A6.2 and an attenuation mutation site, which arose after serial passaging in culture and led to a loss in lethality in STAT1-/- mice, respectively. Modeling of a Fab fragment and crystal structures of the P dimer into the cryoelectron microscopy three-dimensional (3D) image reconstruction of the A6.2/ MNV-1 complex indicated that the closed conformation is most likely bound to the Fab fragment and that the antibody contact is localized to the A′-B′ and E′-F′ loops. Therefore, we hypothesize that these loop regions and the flexibility of the P domains play important roles during MNV-1 binding to the cell surface.

Original languageEnglish (US)
Pages (from-to)5695-5705
Number of pages11
JournalJournal of Virology
Volume84
Issue number11
DOIs
StatePublished - Jun 2010
Externally publishedYes

Fingerprint

Norovirus
Capsid Proteins
coat proteins
X-radiation
X-Rays
mice
Immunoglobulin Fab Fragments
Cryoelectron Microscopy
mutation
Mutation
Computer-Assisted Image Processing
Three-Dimensional Imaging
Protein Domains
cell structures
gastroenteritis
Gastroenteritis
crystal structure
crystallization
Crystallization
Neutralizing Antibodies

ASJC Scopus subject areas

  • Immunology
  • Virology

Cite this

High-resolution x-ray structure and functional analysis of the murine norovirus 1 capsid protein protruding domain. / Taube, Stefan; Rubin, John R.; Katpally, Umesh; Smith, Thomas; Kendall, Ann; Stuckey, Jeanne A.; Wobus, Christiane E.

In: Journal of Virology, Vol. 84, No. 11, 06.2010, p. 5695-5705.

Research output: Contribution to journalArticle

Taube, Stefan ; Rubin, John R. ; Katpally, Umesh ; Smith, Thomas ; Kendall, Ann ; Stuckey, Jeanne A. ; Wobus, Christiane E. / High-resolution x-ray structure and functional analysis of the murine norovirus 1 capsid protein protruding domain. In: Journal of Virology. 2010 ; Vol. 84, No. 11. pp. 5695-5705.
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