Interleukin-6 (IL-6) and receptor (IL6-R) gene haplotypes associate with amniotic fluid protein concentrations in preterm birth

Digna R. Velez, Stephen J. Fortunato, Scott M. Williams, Ramkumar Menon

Research output: Contribution to journalArticle

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Abstract

Spontaneous preterm birth (PTB-gestational age <37 weeks) occurs in ∼450 000 births annually in the United States and is one of the leading causes of neonatal morbidity and mortality. Risk of PTB is affected by complex gene-environment interactions that are not well understood. We examined the PTB candidate gene, Interleukin 6 (IL-6) and its receptor (IL6-R) in both Caucasian (145 PTB and 194 term maternal; 140 PTB and 179 term fetal) and African-American (76 PTB and 191 term maternal; 66 PTB and 183 term fetal) DNA. Eight single nucleotide polymorphisms (SNPs) in IL-6 and 22 SNPs in IL6R were examined for association with IL-6 amniotic fluid (AF) concentrations, as concentration of IL-6 is a hypothesized risk factor. In addition, IL-6 and IL6-R SNPs were analyzed for associations with PTB. Haplotype associations were tested by sliding windows. No strong single marker effects were observed in Caucasians; however, in African-American maternal IL-6R marker rs4553185 associated with PTB (allele P=4.49 × 10-3 and genotype P = 0.01). The strongest haplotype associations were observed in IL-6R with IL-6 cytokine concentration as outcome: Caucasian fetal (rs4601580-rs4845618) P = 1.6 × 10-3 and African-American maternal (rs4601580-rs4845618- rs6687726-rs7549338) P = 2.30 × 103. Significant results converged on three regions in the two genes: in IL-6 markers rs1800797, rs1800796 and rs1800795; in IL-6R markers rs4075015, rs4601580, rs4645618, rs6687726 and rs7549338 and markers rs4845623, rs4537545 and rs4845625. In conclusion, our results suggest that IL-6 AF concentration, in situations of PTB, result from variation in IL-6 and more importantly IL-6R.

Original languageEnglish (US)
Pages (from-to)1619-1630
Number of pages12
JournalHuman Molecular Genetics
Volume17
Issue number11
DOIs
StatePublished - Jun 2008
Externally publishedYes

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Interleukin-6 Receptors
Premature Birth
Amniotic Fluid
Haplotypes
Interleukin-6
Genes
Mothers
African Americans
Proteins
Single Nucleotide Polymorphism
Gene-Environment Interaction
Infant Mortality
Gestational Age
Alleles
Genotype
Parturition
Cytokines
Morbidity
DNA

ASJC Scopus subject areas

  • Genetics

Cite this

Interleukin-6 (IL-6) and receptor (IL6-R) gene haplotypes associate with amniotic fluid protein concentrations in preterm birth. / Velez, Digna R.; Fortunato, Stephen J.; Williams, Scott M.; Menon, Ramkumar.

In: Human Molecular Genetics, Vol. 17, No. 11, 06.2008, p. 1619-1630.

Research output: Contribution to journalArticle

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abstract = "Spontaneous preterm birth (PTB-gestational age <37 weeks) occurs in ∼450 000 births annually in the United States and is one of the leading causes of neonatal morbidity and mortality. Risk of PTB is affected by complex gene-environment interactions that are not well understood. We examined the PTB candidate gene, Interleukin 6 (IL-6) and its receptor (IL6-R) in both Caucasian (145 PTB and 194 term maternal; 140 PTB and 179 term fetal) and African-American (76 PTB and 191 term maternal; 66 PTB and 183 term fetal) DNA. Eight single nucleotide polymorphisms (SNPs) in IL-6 and 22 SNPs in IL6R were examined for association with IL-6 amniotic fluid (AF) concentrations, as concentration of IL-6 is a hypothesized risk factor. In addition, IL-6 and IL6-R SNPs were analyzed for associations with PTB. Haplotype associations were tested by sliding windows. No strong single marker effects were observed in Caucasians; however, in African-American maternal IL-6R marker rs4553185 associated with PTB (allele P=4.49 × 10-3 and genotype P = 0.01). The strongest haplotype associations were observed in IL-6R with IL-6 cytokine concentration as outcome: Caucasian fetal (rs4601580-rs4845618) P = 1.6 × 10-3 and African-American maternal (rs4601580-rs4845618- rs6687726-rs7549338) P = 2.30 × 103. Significant results converged on three regions in the two genes: in IL-6 markers rs1800797, rs1800796 and rs1800795; in IL-6R markers rs4075015, rs4601580, rs4645618, rs6687726 and rs7549338 and markers rs4845623, rs4537545 and rs4845625. In conclusion, our results suggest that IL-6 AF concentration, in situations of PTB, result from variation in IL-6 and more importantly IL-6R.",
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