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Multicenter DSC–MRI-based radiomics predict IDH mutation in gliomas

  • Georgios C. Manikis
  • , Georgios S. Ioannidis
  • , Loizos Siakallis
  • , Katerina Nikiforaki
  • , Michael Iv
  • , Diana Vozlic
  • , Katarina Surlan-popovic
  • , Max Wintermark
  • , Sotirios Bisdas
  • , Kostas Marias

Research output: Contribution to journal › Article › peer-review

Abstract

To address the current lack of dynamic susceptibility contrast magnetic resonance imaging (DSC–MRI)-based radiomics to predict isocitrate dehydrogenase (IDH) mutations in gliomas, we present a multicenter study that featured an independent exploratory set for radiomics model development and external validation using two independent cohorts. The maximum performance of the IDH mutation status prediction on the validation set had an accuracy of 0.544 (Cohen’s kappa: 0.145, F1-score: 0.415, area under the curve-AUC: 0.639, sensitivity: 0.733, specificity: 0.491), which significantly improved to an accuracy of 0.706 (Cohen’s kappa: 0.282, F1-score: 0.474, AUC: 0.667, sensitivity: 0.6, specificity: 0.736) when dynamic-based standardization of the images was per-formed prior to the radiomics. Model explainability using local interpretable model-agnostic explanations (LIME) and Shapley additive explanations (SHAP) revealed potential intuitive correlations between the IDH–wildtype increased heterogeneity and the texture complexity. These results strengthened our hypothesis that DSC–MRI radiogenomics in gliomas hold the potential to provide increased predictive performance from models that generalize well and provide understandable patterns between IDH mutation status and the extracted features toward enabling the clinical trans-lation of radiogenomics in neuro-oncology.

Original languageEnglish (US)
Article number3965
JournalCancers
Volume13
Issue number16
DOIs
StatePublished - Aug 2 2021
Externally publishedYes

Keywords

  • Dynamic susceptibility contrast MRI
  • Explainability
  • External validation
  • Generalizabil-ity
  • Gliomas
  • IDH mutation
  • Radiomics

ASJC Scopus subject areas

  • Oncology
  • Cancer Research

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