Predicting key long-range interaction sites by B-factors

Peng Chen; Kyungsook Han; Xueling Li; De Shuang Huang

doi:10.2174/092986608784567573

Predicting key long-range interaction sites by B-factors

Peng Chen
, Kyungsook Han
, Xueling Li
, De Shuang Huang

Research output: Contribution to journal › Article › peer-review

17 Scopus citations

Abstract

In this paper, we adopted the bounded support vector machine to locate the key long-range interaction sites by the use of predicted local lowest B-factors. As a result, the key long-range interaction residues can be located based on information of local lowest B-factor sites.

Original language	English (US)
Pages (from-to)	478-483
Number of pages	6
Journal	Protein and Peptide Letters
Volume	15
Issue number	5
DOIs	https://doi.org/10.2174/092986608784567573
State	Published - Jun 2008
Externally published	Yes

Keywords

B-factors
Bounded support vector machine
Local lowest B-factor sites
Long-range interaction sites

ASJC Scopus subject areas

Structural Biology
Biochemistry

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10.2174/092986608784567573

Cite this

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title = "Predicting key long-range interaction sites by B-factors",

abstract = "In this paper, we adopted the bounded support vector machine to locate the key long-range interaction sites by the use of predicted local lowest B-factors. As a result, the key long-range interaction residues can be located based on information of local lowest B-factor sites.",

keywords = "B-factors, Bounded support vector machine, Local lowest B-factor sites, Long-range interaction sites",

author = "Peng Chen and Kyungsook Han and Xueling Li and Huang, \{De Shuang\}",

year = "2008",

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doi = "10.2174/092986608784567573",

language = "English (US)",

volume = "15",

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publisher = "Bentham Science Publishers",

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AU - Chen, Peng

AU - Han, Kyungsook

AU - Li, Xueling

AU - Huang, De Shuang

PY - 2008/6

Y1 - 2008/6

N2 - In this paper, we adopted the bounded support vector machine to locate the key long-range interaction sites by the use of predicted local lowest B-factors. As a result, the key long-range interaction residues can be located based on information of local lowest B-factor sites.

AB - In this paper, we adopted the bounded support vector machine to locate the key long-range interaction sites by the use of predicted local lowest B-factors. As a result, the key long-range interaction residues can be located based on information of local lowest B-factor sites.

KW - B-factors

KW - Bounded support vector machine

KW - Local lowest B-factor sites

KW - Long-range interaction sites

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UR - https://www.scopus.com/pages/publications/45749134979#tab=citedBy

U2 - 10.2174/092986608784567573

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M3 - Article

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AN - SCOPUS:45749134979

SN - 0929-8665

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EP - 483

JO - Protein and Peptide Letters

JF - Protein and Peptide Letters

IS - 5

ER -

Predicting key long-range interaction sites by B-factors

Abstract

Keywords

ASJC Scopus subject areas

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