SCEPTRANS

An online tool for analyzing periodic transcription in yeast

Andrzej Kudlicki, Malgorzata Rowicka-Kudlicka, Zbyszek Otwinowski

Research output: Contribution to journalArticle

25 Citations (Scopus)

Abstract

Summary: SCEPTRANS is designed for analysis of microarray timecourse data related to periodic phenomena in the budding yeast. The server allows for easy viewing of temporal profiles of multiple genes in a number of datasets. Additional functionality includes searching for coexpressed genes, periodicity and correlation analysis, integrating functional annotation and localization data as well as advanced operations on sets of genes.

Original languageEnglish (US)
Pages (from-to)1559-1561
Number of pages3
JournalBioinformatics
Volume23
Issue number12
DOIs
StatePublished - Jun 15 2007
Externally publishedYes

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Transcription
Yeast
Genes
Yeasts
Gene
Saccharomycetales
Correlation Analysis
Periodicity
Microarray Analysis
Microarrays
Microarray Data
Annotation
Servers
Server

ASJC Scopus subject areas

  • Clinical Biochemistry
  • Computer Science Applications
  • Computational Theory and Mathematics

Cite this

SCEPTRANS : An online tool for analyzing periodic transcription in yeast. / Kudlicki, Andrzej; Rowicka-Kudlicka, Malgorzata; Otwinowski, Zbyszek.

In: Bioinformatics, Vol. 23, No. 12, 15.06.2007, p. 1559-1561.

Research output: Contribution to journalArticle

Kudlicki, Andrzej ; Rowicka-Kudlicka, Malgorzata ; Otwinowski, Zbyszek. / SCEPTRANS : An online tool for analyzing periodic transcription in yeast. In: Bioinformatics. 2007 ; Vol. 23, No. 12. pp. 1559-1561.
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