The Mouse Intestinal Fatty Acid Binding Protein Gene

Nucleotide Sequence, Pattern of Developmental and Regional Expression, and Proposed Structure of Its Protein Product

Rebecca P. Green, Steven Cohn, James C. Sacchettini, Kelly E. Jackson, Jeffrey I. Gordon

Research output: Contribution to journalArticle

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Abstract

The rat intestinal fatty acid binding protein (I-FABP) gene has been used as a model to study temporal and spatial differentiation of the gut epithelium while its protein product has been used as a model for examining the atomic details of noncovalent fatty acid-protein interactions. We have isolated the mouse I-FABP gene (Fabpi) and determined its nucleotide sequence. Comparisons of the orthologous mouse, rat, and human I-FABP genes revealed three conserved domains in their otherwise divergent 5′ nontranscribed sequences. RNA blot hybridization and multilabel immunocytochemical methods were used to compare the developmental stage-specific patterns of activation of the rat and mouse genes. In addition, Fabpi expression in enterocytes was examined as a function of their differentiation along the crypto-to-villus and duodenal-to-colonic axes of the small intestine. Based on the similar temporal and geographic patterns of mouse and rat I-FABP expression described here and the results of our earlier studies of transgenic mice containing rat Fabpi/human growth hormone fusion genes, we propose that one of the conserved domains, spanning nucleotides −500 to −419 in mouse Fabpi, and/or a 14-bp element, are necessary for establishing and maintaining its region-specific expression along the duodenal-to-colonic axis of the perpetually renewing gut epithelium. Finally, predictions of the structure of mouse I-FABP using the refined 2.0 Å model of rat I-FABP, suggest that a proline found at position 69 of the mouse, but not rat, protein may affect its ligand binding properties.

Original languageEnglish (US)
Pages (from-to)31-41
Number of pages11
JournalDNA and Cell Biology
Volume11
Issue number1
DOIs
StatePublished - Jan 1 1992
Externally publishedYes

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Fatty Acid-Binding Proteins
Genes
Proteins
Epithelium
Human Growth Hormone
Enterocytes
Gene Fusion
Proline
Transgenic Mice
Small Intestine
Fatty Acids
Nucleotides
RNA
Ligands

ASJC Scopus subject areas

  • Molecular Biology
  • Genetics
  • Cell Biology

Cite this

The Mouse Intestinal Fatty Acid Binding Protein Gene : Nucleotide Sequence, Pattern of Developmental and Regional Expression, and Proposed Structure of Its Protein Product. / Green, Rebecca P.; Cohn, Steven; Sacchettini, James C.; Jackson, Kelly E.; Gordon, Jeffrey I.

In: DNA and Cell Biology, Vol. 11, No. 1, 01.01.1992, p. 31-41.

Research output: Contribution to journalArticle

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