Whole-genome sequence of Hafnia alvei HUMV-5920, a human isolate

María Lázaro-Díez, Santiago Redondo-Salvo, Aroa Arboleya-Agudo, Javier Gonzalo Ocejo-Vinyals, Itziar Chapartegui-González, Alain A. Ocampo-Sosa, Felix Acosta, Luis Martínez-Martínez, José Ramos-Vivas

Research output: Contribution to journalArticlepeer-review

Abstract

A clinical isolate of Hafnia alvei (strain HUMV-5920) was obtained from a urine sample from an adult patient. We report here its complete genome assembly using PacBio single-molecule real-time (SMRT) sequencing, which resulted in a chromosome with 4.5 Mb and a circular contig of 87 kb. About 4,146 protein-coding genes are predicted from this assembly.

Original languageEnglish (US)
Article numbere00556-16
JournalGenome Announcements
Volume4
Issue number3
DOIs
StatePublished - 2016
Externally publishedYes

ASJC Scopus subject areas

  • Molecular Biology
  • Genetics

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