Whole-genome sequencing reveals misidentification of a multidrug-resistant urine clinical isolate as Corynebacterium urealyticum

Keyphrases

• Multidrug-resistant 100%
• Whole Genome Sequencing 100%
• Misidentification 100%
• Corynebacterium Urealyticum 100%
• Corynebacterium 66%
• Class 1 Integron 66%
• Clinically Significant 33%
• Culture-based 33%
• Public Database 33%
• Urease 33%
• Genome Size 33%
• Urinary Tract Infection 33%
• Gentamicin 33%
• Erythromycin 33%
• Kanamycin 33%
• Spain 33%
• Trimethoprim-sulfamethoxazole (TMP-SMX) 33%
• Resistance Factor 33%
• Identification Analysis 33%
• Resistance Genes 33%
• Ampicillin 33%
• Antimicrobial Susceptibility 33%
• Species Level 33%
• Moderately Resistant 33%
• GC Content 33%
• Santander 33%
• Antimicrobial Resistance Mechanisms 33%
• Average nucleotide Identity 33%
• Draft Genome Sequence 33%
• Illumina HiSeq 2500 33%
• Microbiological Methods 33%
• OrthoANIu 33%
• Sul1 Gene 33%
• Clinical Urine Samples 33%
• VITEK MS 33%
• Identification Tool 33%
• Resource Integration 33%
• Pathosystem 33%
• Emissions Database for Global Atmospheric Research (EDGAR) 33%
• SPADE 33%
• Phenotypic Antimicrobial Susceptibility Testing 33%
• Strain Identification 33%
• PATRIC 33%

Biochemistry, Genetics and Molecular Biology

• Whole Genome Sequencing 100%
• Corynebacterium urealyticum 100%
• Antibiotic Sensitivity 66%
• Integron 66%
• Corynebacterium 66%
• Genome Sequencing 33%
• Urine Sampling 33%
• Gentamicin 33%
• Antibiotic Resistance 33%
• Ampicillin 33%
• Genome Size 33%
• GC-content 33%
• Urease 33%
• Epsilometer Test 33%
• Kanamycin 33%
• Radioallergosorbent Test 33%
• Sulfamethoxazole 33%
• Trimethoprim 33%

Immunology and Microbiology

• Whole Genome Sequencing 100%
• Corynebacterium urealyticum 100%
• Antibiotic Sensitivity 66%
• Corynebacterium 66%
• Integron 66%
• Genome Sequencing 33%
• Urinary Tract 33%
• Urine Sampling 33%
• Genome Size 33%
• Radioallergosorbent Test 33%
• Etest 33%
• Infection 33%
• Antibiotic Resistance 33%